RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 ANKRA2Q9H9E1 313 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 Q9N2J8 555 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 CCM2LQ9NUG4 571 aaPredicted RBP11.91□□□□□ -0.5
RTN3-207ENST00000536011 FBXL2Q9UKC9 423 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 PACSIN3Q9UKS6 424 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 C19orf53Q9UNZ5 99 aaPredicted RBP11.91□□□□□ -0.5
RTN3-207ENST00000536011 HRNRQ86YZ3 2850 aaPredicted RBP11.91□□□□□ -0.5
RTN3-207ENST00000536011 NF1P21359 2839 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 DOCK7Q96N67 2140 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 G3V2L1 256 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 PLOD2O00469 737 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 CHEK2O96017 543 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 PROCP04070 461 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 CRHP06850 196 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 FAM153BP0C7A2 387 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 UROSP10746 265 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 ZNF708P17019 499 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 DDX5P17844 614 aaKnown RBP11.9□□□□□ -0.5
RTN3-207ENST00000536011 CRHR1P34998 444 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 MC3RP41968 323 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 AGFG1P52594 562 aaKnown RBP11.9□□□□□ -0.5
RTN3-207ENST00000536011 FAM153CQ494X1 144 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 VPS26BQ4G0F5 336 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 SH2D4BQ5SQS7 431 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 NOXRED1Q6NXP6 359 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 TMEM107Q6UX40 140 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 P4HA3Q7Z4N8 544 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 OR2L13Q8N349 312 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 MEIOBQ8N635 442 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 DACH2Q96NX9 599 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 ALPK1Q96QP1 1244 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 FAM120CQ9NX05 1096 aaKnown RBP11.9□□□□□ -0.5
RTN3-207ENST00000536011 CLCF1Q9UBD9 225 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 EMCNQ9ULC0 261 aa11.9□□□□□ -0.5
RTN3-207ENST00000536011 POLR3HQ9Y535 204 aaPredicted RBP11.9□□□□□ -0.5
RTN3-207ENST00000536011 AKAP6Q13023 2319 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 SLC28A1O00337 649 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 UBFD1O14562 309 aaKnown RBP11.89□□□□□ -0.51
RTN3-207ENST00000536011 COPEO14579 308 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 RGS14O43566 566 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 SCO2O43819 266 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 PLIN3O60664 434 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 KCNH1O95259 989 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 NEFHP12036 1026 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 PEPDP12955 493 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 CD99P14209 185 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 CPA3P15088 417 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 SLCO1A2P46721 670 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 GAS1P54826 345 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 FOXA1P55317 472 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 CLDN18P56856 261 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 PSG6Q00889 435 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 FGFBP1Q14512 234 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 RAET1LQ5VY80 246 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 LIPMQ5VYY2 423 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 FAM219BQ5XKK7 198 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 OR5M10Q6IEU7 315 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 PAMR1Q6UXH9 720 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 LUZP2Q86TE4 346 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 TDRPQ86YL5 185 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 ZFP28Q8NHY6 868 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.89□□□□□ -0.51
RTN3-207ENST00000536011 UBLCP1Q8WVY7 318 aaPredicted RBP11.89□□□□□ -0.51
RTN3-207ENST00000536011 INTS12Q96CB8 462 aaKnown RBP11.89□□□□□ -0.51
RTN3-207ENST00000536011 MBD6Q96DN6 1003 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 ZNF764Q96H86 408 aaPredicted RBP11.89□□□□□ -0.51
RTN3-207ENST00000536011 AMDHD1Q96NU7 426 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 TRMOQ9BU70 441 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 OXSMQ9NWU1 459 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 GALNT8Q9NY28 637 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 STOML1Q9UBI4 398 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 NDRG3Q9UGV2 375 aa11.89□□□□□ -0.51
RTN3-207ENST00000536011 RPH3AQ9Y2J0 694 aaPredicted RBP11.89□□□□□ -0.51
RTN3-207ENST00000536011 A0A1W2PPM1 405 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 SLC22A20A6NK97 555 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 UPK1AO00322 258 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 CASKO14936 926 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 PDPK1O15530 556 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 HCRTR2O43614 444 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 ZIC3O60481 467 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 SEC22BO75396 215 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 PSMG1O95456 288 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 IL33O95760 270 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 RAF1P04049 648 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 PRPH2P23942 346 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 GPC1P35052 558 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 STARP49675 285 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 FOXF2Q12947 444 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 KEAP1Q14145 624 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 TGIF2LYQ8IUE0 185 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 GCNT2Q8N0V5 402 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 FADS6Q8N9I5 356 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 OR2M3Q8NG83 312 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 OR4N2Q8NGD1 307 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.88□□□□□ -0.51
RTN3-207ENST00000536011 RNF166Q96A37 237 aaPredicted RBP11.88□□□□□ -0.51
RTN3-207ENST00000536011 ELP4Q96EB1 424 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 CCT7Q99832 543 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 PIGQQ9BRB3 760 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 TBL1XR1Q9BZK7 514 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms