RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ZNF835Q9Y2P0 537 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 HRH3Q9Y5N1 445 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 RNF103-CHMP3A0A140T963 221 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 CDC40O60508 579 aaKnown RBP eCLIP20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 PDE9AO76083 593 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 KCNH1O95259 989 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 CELA3AP09093 270 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 MAN2A2P49641 1150 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 GUCY1A3Q02108 690 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 RBPJQ06330 500 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 TIGD3Q6B0B8 471 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 BHLHB9Q6PI77 547 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 PACS2Q86VP3 889 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 GOT1L1Q8NHS2 421 aaPredicted RBP20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 PIGUQ9H490 435 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 CCDC134Q9H6E4 229 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 NPHS2Q9NP85 383 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 DCTN4Q9UJW0 460 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 FAF1Q9UNN5 650 aaPredicted RBP20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 LIPGQ9Y5X9 500 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 ZGRF1Q86YA3 2104 aa20.78■□□□□ 0.92
SFSWAP-204ENST00000535399 EML6Q6ZMW3 1958 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 HIVEP3Q5T1R4 2406 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 USP9XQ93008 2570 aaPredicted RBP20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 C2orf72A6NCS6 295 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 ADAM10O14672 748 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 SNPHO15079 494 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 ZNHIT1O43257 154 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 SEMA7AO75326 666 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 KCNK2O95069 426 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 IGHG3P01860 377 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 IL6P05231 212 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 KRT16P08779 473 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 EVI2BP34910 448 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 RFX3P48380 749 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 MASP1P48740 699 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 GAS1P54826 345 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 PSMD4P55036 377 aaKnown RBP20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 SLC10A1Q14973 349 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 Q6ZPB1 254 aaPredicted RBP20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 C6orf120Q7Z4R8 191 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 FAM26EQ8N5C1 309 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 COX18Q8N8Q8 333 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 GNRHR2Q96P88 292 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 INPP5KQ9BT40 448 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 UBQLN3Q9H347 655 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 SERHL2Q9H4I8 314 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 QPCTLQ9NXS2 382 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 EXPH5Q8NEV8 1989 aa20.77■□□□□ 0.92
SFSWAP-204ENST00000535399 NUP214P35658 2090 aaPredicted RBP20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 A0A1B0GTH9 108 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 FAM234BA2RU67 622 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 GNB5O14775 395 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 FADS1O60427 444 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 SLC19A2O60779 497 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 UQCRC2P22695 453 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 POLR2JP52435 117 aaKnown RBP20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 FIGNL1Q6PIW4 674 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 ANGPTL8Q6UXH0 198 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 TRILQ7L0X0 811 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 ZAR1Q86SH2 424 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 SPPL2CQ8IUH8 684 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 CDS1Q92903 461 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 SIKE1Q9BRV8 207 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 BTBD2Q9BX70 525 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 B4GALT7Q9UBV7 327 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 C15orf41Q9Y2V0 281 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 WIF1Q9Y5W5 379 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 KCNE3Q9Y6H6 103 aa20.76■□□□□ 0.91
SFSWAP-204ENST00000535399 LRRK2Q5S007 2527 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 NINQ8N4C6 2090 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 A0A1B0GVC2 190 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 UTS2O95399 124 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 ELAVL4P26378 380 aaKnown RBP20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 PTPN6P29350 595 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 CDKN2CP42773 168 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 ATP4BP51164 291 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 STX1BP61266 288 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 RPS26P62854 115 aaKnown RBP20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 POU6F2P78424 691 aaPredicted RBP20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 LRRC74AQ0VAA2 488 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 CCNJQ5T5M9 372 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 SAXO2Q658L1 398 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 GALNT10Q86SR1 603 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 WDSUB1Q8N9V3 476 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 OR1J4Q8NGS1 313 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 ADAMTS15Q8TE58 950 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 CHMP6Q96FZ7 201 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 OR7D2Q96RA2 312 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 RTN4RQ9BZR6 473 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 ACKR4Q9NPB9 350 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 SERHLQ9NQF3 203 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 FGFR1OP2Q9NVK5 253 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 FBXO34Q9NWN3 711 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 ABCG2Q9UNQ0 655 aa20.75■□□□□ 0.91
SFSWAP-204ENST00000535399 CCDC154A6NI56 674 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 SOX30O94993 753 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 C1QCP02747 245 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms