RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ESX1Q8N693 406 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 NLGN4YQ8NFZ3 816 aaPredicted RBP17.18■□□□□ 0.34
SMPD1-208ENST00000533123 B4GALNT2Q8NHY0 566 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 CT55Q8WUE5 264 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 PTPMT1Q8WUK0 201 aaPredicted RBP17.18■□□□□ 0.34
SMPD1-208ENST00000533123 OR7D2Q96RA2 312 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 CNPPD1Q9BV87 410 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 B3GNT4Q9C0J1 378 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 PTGFRNQ9P2B2 879 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 AKAP13Q12802 2813 aa17.18■□□□□ 0.34
SMPD1-208ENST00000533123 IGHV3-20A0A0C4DH32 117 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 STMND1H3BQB6 276 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 HS6ST1O60243 411 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 PLOD3O60568 738 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 MFN2O95140 757 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 HPRP00739 348 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 FHL5Q5TD97 284 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 SATL1Q86VE3 508 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 HIPK1Q86Z02 1210 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 GPR32P1Q8NGA4 272 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 METTL21AQ8WXB1 218 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 COL21A1Q96P44 957 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 RBM4BQ9BQ04 359 aaKnown RBP17.17■□□□□ 0.34
SMPD1-208ENST00000533123 RBM4Q9BWF3 364 aaKnown RBP17.17■□□□□ 0.34
SMPD1-208ENST00000533123 TOR3AQ9H497 397 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 OCEL1Q9H607 264 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 ADAP2Q9NPF8 381 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 TESMINQ9Y4I5 508 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 CDRT15L2A8MXV6 281 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 J3KTA2 159 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 CD247P20963 164 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 S1PR1P21453 382 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 RRM2P31350 389 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 SSTR4P31391 388 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 CAPGP40121 348 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 MAN2A2P49641 1150 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 CAMK2BQ13554 666 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 ARMC8Q8IUR7 673 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 AMER2Q8N7J2 671 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 MIPOL1Q8TD10 442 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 GEMIN6Q8WXD5 167 aaKnown RBP17.17■□□□□ 0.34
SMPD1-208ENST00000533123 PELOQ9BRX2 385 aaKnown RBP17.17■□□□□ 0.34
SMPD1-208ENST00000533123 REEP1Q9H902 201 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 ASCL3Q9NQ33 180 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 THUMPD1Q9NXG2 353 aaKnown RBP17.17■□□□□ 0.34
SMPD1-208ENST00000533123 USE1Q9NZ43 259 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 C19orf53Q9UNZ5 99 aaPredicted RBP17.17■□□□□ 0.34
SMPD1-208ENST00000533123 ERVK-19Q9WJR5 959 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 CLCA3PQ9Y6N3 262 aa17.17■□□□□ 0.34
SMPD1-208ENST00000533123 A0A087WV62 115 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 SMIM31A0A1B0GVY4 71 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 TMEM247A6NEH6 219 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 RAD1O60671 282 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 UMODP07911 640 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 DNAJA1P31689 397 aaKnown RBP17.16■□□□□ 0.34
SMPD1-208ENST00000533123 RPS18P62269 152 aaKnown RBP17.16■□□□□ 0.34
SMPD1-208ENST00000533123 FOXC1Q12948 553 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 PUM1Q14671 1186 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMPD1-208ENST00000533123 ELAVL1Q15717 326 aaKnown RBP17.16■□□□□ 0.34
SMPD1-208ENST00000533123 KRT80Q6KB66 452 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 ANKRD37Q7Z713 158 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 LGI4Q8N135 537 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 MBOAT4Q96T53 435 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 AMBRA1Q9C0C7 1298 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 NTMQ9P121 344 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 SLITRK5O94991 958 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 CBX7O95931 251 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 FPR1P21462 350 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 FUT4P22083 530 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 ADARB1P78563 741 aaKnown RBP17.16■□□□□ 0.34
SMPD1-208ENST00000533123 COMTD1Q86VU5 262 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 OR52R1Q8NGF1 315 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 OR2Y1Q8NGV0 311 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 C8orf44Q96CB5 159 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 SENP5Q96HI0 755 aaPredicted RBP17.16■□□□□ 0.34
SMPD1-208ENST00000533123 MS4A4EQ96PG1 132 aa17.16■□□□□ 0.34
SMPD1-208ENST00000533123 ZNF300Q96RE9 604 aaPredicted RBP17.16■□□□□ 0.34
SMPD1-208ENST00000533123 PDP1Q9P0J1 537 aaPredicted RBP17.16■□□□□ 0.34
SMPD1-208ENST00000533123 TMEFF2Q9UIK5 374 aaPredicted RBP17.16■□□□□ 0.34
SMPD1-208ENST00000533123 MITFO75030 526 aaPredicted RBP17.15■□□□□ 0.34
SMPD1-208ENST00000533123 OR6B1O95007 311 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 MYF6P23409 242 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 GALNSP34059 522 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 DUSP8Q13202 625 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 GPAT3Q53EU6 434 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 MFSD12Q6NUT3 480 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 SLC16A11Q8NCK7 471 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 APOBEC4Q8WW27 367 aaKnown RBP17.15■□□□□ 0.34
SMPD1-208ENST00000533123 ACTRT3Q9BYD9 372 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 OR8D2Q9GZM6 311 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 NRSN2Q9GZP1 204 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 QRSL1Q9H0R6 528 aaKnown RBP17.15■□□□□ 0.34
SMPD1-208ENST00000533123 THSD1Q9NS62 852 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 FARSAQ9Y285 508 aaKnown RBP17.15■□□□□ 0.34
SMPD1-208ENST00000533123 PDE9AO76083 593 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 SMIM18P0DKX4 95 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 F8A1P23610 371 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 PIGAP37287 484 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 STAT5AP42229 794 aa17.15■□□□□ 0.34
SMPD1-208ENST00000533123 ANXA11P50995 505 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms