RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, human

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-223	ENST00000533079	YAE1D1	Q9NRH1	226 aa		11.2	□□□□□ -0.62
CAPN1-223	ENST00000533079	TMEM160	Q9NX00	188 aa		11.2	□□□□□ -0.62
CAPN1-223	ENST00000533079	TXNDC16	Q9P2K2	825 aa		11.2	□□□□□ -0.62
CAPN1-223	ENST00000533079	HEY2	Q9UBP5	337 aa		11.2	□□□□□ -0.62
CAPN1-223	ENST00000533079	DTX4	Q9Y2E6	619 aa		11.2	□□□□□ -0.62
CAPN1-223	ENST00000533079		H0YIV9	168 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	T	O15178	435 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	EED	O75530	441 aa	Known RBP	11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	SEMA3D	O95025	777 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	ATP1B1	P05026	303 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	THBD	P07204	575 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	DHRS4L1	P0CG22	281 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	CPM	P14384	443 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	POR	P16435	677 aa	Predicted RBP	11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	EPB42	P16452	691 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	NT5E	P21589	574 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	THBS2	P35442	1172 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	DSCR4	P56555	118 aa	Predicted RBP	11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	WDR4	P57081	412 aa	Known RBP	11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	GANAB	Q14697	944 aa	Known RBP	11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	NNAT	Q16517	81 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	LIPJ	Q5W064	366 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	FAM214B	Q7L5A3	538 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	MED12L	Q86YW9	2145 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	GTPBP3	Q969Y2	492 aa	Known RBP	11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	MRRF	Q96E11	262 aa	Known RBP	11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	SLC35A4	Q96G79	324 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	PLPPR2	Q96GM1	343 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	COL21A1	Q96P44	957 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	MTERF1	Q99551	399 aa	Known RBP	11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	RBBP8	Q99708	897 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	ITPA	Q9BY32	194 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	KLHL4	Q9C0H6	718 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	LRTM1	Q9HBL6	345 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	BARX1	Q9HBU1	254 aa	Predicted RBP	11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	LPAR3	Q9UBY5	353 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	PRODH2	Q9UF12	536 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	DCDC2	Q9UHG0	476 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	FBXL2	Q9UKC9	423 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	LAMP3	Q9UQV4	416 aa		11.19	□□□□□ -0.62
CAPN1-223	ENST00000533079	C2orf72	A6NCS6	295 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	WASHC1	A8K0Z3	465 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	FOXE1	O00358	373 aa	Predicted RBP	11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	PIAS1	O75925	651 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	GSTA1	P08263	222 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	PYGB	P11216	843 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	STMN1	P16949	149 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	S1PR1	P21453	382 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	DRD4	P21917	467 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	DRD5	P21918	477 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	DPP4	P27487	766 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	ETV4	P43268	484 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	PPIC	P45877	212 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	XK	P51811	444 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	B3GALT5-AS1	P59052	145 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	MAP4K2	Q12851	820 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	EFR3A	Q14156	821 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	PRICKLE4	Q2TBC4	344 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	C6orf52	Q5T4I8	152 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	TTC19	Q6DKK2	380 aa	Predicted RBP	11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	DNM1P46	Q6ZS02	220 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	C22orf34	Q6ZV56	151 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	PIGW	Q7Z7B1	504 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	C4orf33	Q8N1A6	199 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	RNF175	Q8N4F7	328 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	ZNF610	Q8N9Z0	462 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	OR6K3	Q8NGY3	331 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	STAG3L4	Q8TBR4	150 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	RNF138	Q8WVD3	245 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	DYDC1	Q8WWB3	177 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	FIG4	Q92562	907 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	GFM2	Q969S9	779 aa	Known RBP	11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	FBXW5	Q969U6	566 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	SLCO5A1	Q9H2Y9	848 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	ZNF639	Q9UID6	485 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	PLLP	Q9Y342	182 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	EMC9	Q9Y3B6	208 aa		11.18	□□□□□ -0.62
CAPN1-223	ENST00000533079	SON	P18583	2426 aa	Known RBP	11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079		A0A1W2PS29	197 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	NDUFAB1	O14561	156 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	COPE	O14579	308 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	PGRMC2	O15173	223 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	BIRC5	O15392	142 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	KERA	O60938	352 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	SPAG7	O75391	227 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	THBS1	P07996	1170 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	GRK2	P25098	689 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	SEC24C	P53992	1094 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	RPS3A	P61247	264 aa	Known RBP	11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	PON3	Q15166	354 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	ZSCAN26	Q16670	478 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	KRTAP24-1	Q3LI83	254 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	C10orf62	Q5T681	223 aa	Predicted RBP	11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	MROH9	Q5TGP6	573 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	HHAT	Q5VTY9	493 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	DESI1	Q6ICB0	168 aa		11.17	□□□□□ -0.62
CAPN1-223	ENST00000533079	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms