RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 SCMH1Q96GD3 660 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 SH3GL1Q99961 368 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 FAM173AQ9BQD7 235 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 TRIM4Q9C037 500 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 OR51I1Q9H343 314 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 SLC52A3Q9NQ40 469 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 KLRF1Q9NZS2 232 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 ABCG2Q9UNQ0 655 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 LIPT1Q9Y234 373 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 PCDHB14Q9Y5E9 798 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 PCDHGA10Q9Y5H3 936 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 CSAG2Q9Y5P2 127 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 CFAP46Q8IYW2 2715 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 LOC100653049A0A140TA62 436 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 ANKRD33BA6NCL7 494 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 PRAMEF25A6NGN4 478 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 TTLL8A6PVC2 850 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 ACOT7O00154 380 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 CLIC1O00299 241 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 TSPAN2O60636 221 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 ZNF354AO60765 605 aaPredicted RBP10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 UGT2B11O75310 529 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 KRT34O76011 436 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 KCNK2O95069 426 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 SNX4O95219 450 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 CRYABP02511 175 aaKnown RBP10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 COX4I1P13073 169 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 CNR1P21554 472 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 PRDX6P30041 224 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 MASP1P48740 699 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 MAN2A2P49641 1150 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 ST13P50502 369 aaKnown RBP10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 PLEKHN1Q494U1 663 aaPredicted RBP10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 PAGE3Q5JUK9 113 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 EXOSC6Q5RKV6 272 aaKnown RBP10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 REP15Q6BDI9 236 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 SLC30A6Q6NXT4 461 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 TMEM81Q6P7N7 255 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 MDGA2Q7Z553 956 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 PACS2Q86VP3 889 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 OR4N2Q8NGD1 307 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 OR5D16Q8NGK9 328 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 SPPL2AQ8TCT8 520 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 XAGE5Q8WWM1 108 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 OTUB1Q96FW1 271 aaPredicted RBP10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 ZNF597Q96LX8 424 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 DOHHQ9BU89 302 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 CCDC106Q9BWC9 280 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 OSBPL11Q9BXB4 747 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 HOXD1Q9GZZ0 328 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 MYLK2Q9H1R3 596 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 EFCAB1Q9HAE3 211 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 CACYBPQ9HB71 228 aaKnown RBP10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 POLE3Q9NRF9 147 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 SDHAF3Q9NRP4 125 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 AGPAT4Q9NRZ5 378 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 CALML5Q9NZT1 146 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 MAP10Q9P2G4 905 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 P2RX2Q9UBL9 471 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 B4GALT7Q9UBV7 327 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 BOKQ9UMX3 212 aaPredicted RBP10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 CHCHD2Q9Y6H1 151 aaPredicted RBP10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 BOD1L1Q8NFC6 3051 aa10.88□□□□□ -0.67
PPFIA1-220ENST00000532024 C15orf38-AP3S2A0A0A6YYH1 394 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 GXYLT2A0PJZ3 443 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 PEX1O43933 1283 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 STX11O75558 287 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 OR12D1P0DN82 309 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 CCL3P10147 92 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 NR2F1P10589 423 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 CYP4B1P13584 511 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 PTPN6P29350 595 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 MEOX1P50221 254 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 MNAT1P51948 309 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 DSTNP60981 165 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 PLGLB1Q02325 96 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 ARHGAP11BQ3KRB8 267 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 FLYWCH1Q4VC44 716 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 GPAT3Q53EU6 434 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.87□□□□□ -0.678e-6■■■■■ 27.9
PPFIA1-220ENST00000532024 PRAMEF20Q5VT98 475 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 FIGNL1Q6PIW4 674 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 ARPINQ7Z6K5 226 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 ZNF227Q86WZ6 799 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 CHDHQ8NE62 594 aaPredicted RBP10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 OIT3Q8WWZ8 545 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 ROPN1LQ96C74 230 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 AURKBQ96GD4 344 aaPredicted RBP10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 CGREF1Q99674 301 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 THUMPD3Q9BV44 507 aaKnown RBP10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 TBL1XR1Q9BZK7 514 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 IL1RL2Q9HB29 575 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 UBQLN4Q9NRR5 601 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 SLC6A13Q9NSD5 602 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 LUZP4Q9P127 313 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 GMEB1Q9Y692 573 aa10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 PRRC2CQ9Y520 2896 aaKnown RBP10.87□□□□□ -0.67
PPFIA1-220ENST00000532024 C5orf58C9J3I9 102 aa10.86□□□□□ -0.67
PPFIA1-220ENST00000532024 H3BNH8 94 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms