RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 RSL1D1O76021 490 aaKnown RBP9.55□□□□□ -0.88
CPSF1-203ENST00000527916 TP53P04637 393 aaPredicted RBP9.55□□□□□ -0.88
CPSF1-203ENST00000527916 IFI6P09912 130 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 UROSP10746 265 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 KRT4P19013 534 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 DDCP20711 480 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 PRPH2P23942 346 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 PTPN6P29350 595 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 PTGDSP41222 190 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 MASP1P48740 699 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 PTH2RP49190 550 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 FOXA1P55317 472 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 EEF1A1P68104 462 aaKnown RBP9.55□□□□□ -0.88
CPSF1-203ENST00000527916 ZNF763Q0D2J5 394 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 LTB4RQ15722 352 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 CFAP157Q5JU67 520 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 SPDYAQ5MJ70 313 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 EEF1A1P5Q5VTE0 462 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 BICRALQ6AI39 1079 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 VASNQ6EMK4 673 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 GSPT2Q8IYD1 628 aaKnown RBP9.55□□□□□ -0.88
CPSF1-203ENST00000527916 PRR22Q8IZ63 422 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 OR1J4Q8NGS1 313 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 EXOSC8Q96B26 276 aaKnown RBP9.55□□□□□ -0.88
CPSF1-203ENST00000527916 TMCO6Q96DC7 493 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 SLC35A4Q96G79 324 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 KCNA7Q96RP8 456 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 NODALQ96S42 347 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 TM9SF2Q99805 663 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 TRMOQ9BU70 441 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 METTL7AQ9H8H3 244 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 RRAGDQ9NQL2 400 aaPredicted RBP9.55□□□□□ -0.88
CPSF1-203ENST00000527916 GIMAP4Q9NUV9 329 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 TAS2R9Q9NYW1 312 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 C6orf203Q9P0P8 240 aaPredicted RBP9.55□□□□□ -0.88
CPSF1-203ENST00000527916 MID2Q9UJV3 735 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 EXO1Q9UQ84 846 aaKnown RBP9.55□□□□□ -0.88
CPSF1-203ENST00000527916 MRPS18CQ9Y3D5 142 aaKnown RBP9.55□□□□□ -0.88
CPSF1-203ENST00000527916 TESMINQ9Y4I5 508 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 CCL27Q9Y4X3 112 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 A0A087WV62 115 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 MYO1GB0I1T2 1018 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 PLOD2O00469 737 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 COPEO14579 308 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 SNPHO15079 494 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 TSPAN2O60636 221 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 UGT2B11O75310 529 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 LRATO95237 230 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 ACTL6AO96019 429 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 CT45A8P0DMV1 189 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 CT45A9P0DMV2 189 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 CYP4B1P13584 511 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 GCKP35557 465 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 MC3RP41968 323 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 SLCO1A2P46721 670 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 PNLIPRP2P54317 469 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 MRPS35P82673 323 aaKnown RBP9.54□□□□□ -0.88
CPSF1-203ENST00000527916 BTKQ06187 659 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 C2orf80Q0P641 193 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 PLCXD2Q0VAA5 305 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 EFR3AQ14156 821 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 KIAA0040Q15053 153 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 TOMM20Q15388 145 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 IMPG1Q17R60 797 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 ERCC6LQ2NKX8 1250 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 CT45A2Q5DJT8 189 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 LIPMQ5VYY2 423 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 FAM219BQ5XKK7 198 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 FAM71E1Q6IPT2 247 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 NOXRED1Q6NXP6 359 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 FAM180BQ6P0A1 224 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 SCIMPQ6UWF3 145 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 PLEKHM3Q6ZWE6 761 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 IKBIPQ70UQ0 350 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 FAM9CQ8IZT9 166 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 RIBC1Q8N443 379 aaPredicted RBP9.54□□□□□ -0.88
CPSF1-203ENST00000527916 MEIOBQ8N635 442 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 C9orf106Q8NAJ2 232 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 OR9A2Q8NGT5 310 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 ZPLD1Q8TCW7 415 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 RNF138Q8WVD3 245 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 ABTB1Q969K4 478 aaPredicted RBP9.54□□□□□ -0.88
CPSF1-203ENST00000527916 DTNBP1Q96EV8 351 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 PIK3IP1Q96FE7 263 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 VSTM2LQ96N03 204 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 COL21A1Q96P44 957 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 OSBPL11Q9BXB4 747 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 MYNNQ9NPC7 610 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 PFDN4Q9NQP4 134 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 MKS1Q9NXB0 559 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 MED12Q93074 2177 aa9.54□□□□□ -0.88
CPSF1-203ENST00000527916 HEATR5AQ86XA9 2040 aa9.53□□□□□ -0.88
CPSF1-203ENST00000527916 HAX1O00165 279 aa9.53□□□□□ -0.88
CPSF1-203ENST00000527916 SLC28A1O00337 649 aa9.53□□□□□ -0.88
CPSF1-203ENST00000527916 GNB5O14775 395 aa9.53□□□□□ -0.88
CPSF1-203ENST00000527916 TLX2O43763 284 aaPredicted RBP9.53□□□□□ -0.88
CPSF1-203ENST00000527916 COQ9O75208 318 aa9.53□□□□□ -0.88
CPSF1-203ENST00000527916 CRCPO75575 148 aa9.53□□□□□ -0.88
CPSF1-203ENST00000527916 REM1O75628 298 aa9.53□□□□□ -0.88
CPSF1-203ENST00000527916 RCBTB2O95199 551 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms