RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 CCDC116Q8IYX3 515 aa12.43□□□□□ -0.42
CSTF3-206ENST00000524827 C1orf52Q8N6N3 182 aaKnown RBP12.43□□□□□ -0.42
CSTF3-206ENST00000524827 ZNF611Q8N823 705 aa12.43□□□□□ -0.42
CSTF3-206ENST00000524827 OR4F6Q8NGB9 312 aa12.43□□□□□ -0.42
CSTF3-206ENST00000524827 OR4N2Q8NGD1 307 aa12.43□□□□□ -0.42
CSTF3-206ENST00000524827 OR5M1Q8NGP8 315 aa12.43□□□□□ -0.42
CSTF3-206ENST00000524827 OR9A2Q8NGT5 310 aa12.43□□□□□ -0.42
CSTF3-206ENST00000524827 ERP27Q96DN0 273 aa12.43□□□□□ -0.42
CSTF3-206ENST00000524827 FOLH1BQ9HBA9 442 aa12.43□□□□□ -0.42
CSTF3-206ENST00000524827 MED11Q9P086 117 aa12.43□□□□□ -0.42
CSTF3-206ENST00000524827 SAR1BQ9Y6B6 198 aa12.43□□□□□ -0.42
CSTF3-206ENST00000524827 CR1P17927 2039 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 PCNX3Q9H6A9 2034 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 FAM187AA6NFU0 413 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 H3BML4 177 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 AQP8O94778 261 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 PDYNP01213 254 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 FCGR2AP12318 317 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 MAGEA4P43358 317 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 MRPS22P82650 360 aaKnown RBP12.42□□□□□ -0.42
CSTF3-206ENST00000524827 STX5Q13190 355 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 VEZF1Q14119 521 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 GANABQ14697 944 aaKnown RBP12.42□□□□□ -0.42
CSTF3-206ENST00000524827 CLEC12BQ2HXU8 276 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 HMBOX1Q6NT76 420 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 STAC2Q6ZMT1 411 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 MILR1Q7Z6M3 343 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 SLC44A2Q8IWA5 706 aaPredicted RBP12.42□□□□□ -0.42
CSTF3-206ENST00000524827 PLD6Q8N2A8 252 aaKnown RBP12.42□□□□□ -0.42
CSTF3-206ENST00000524827 METTL25Q8N6Q8 603 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 SELENOMQ8WWX9 145 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 MRRFQ96E11 262 aaKnown RBP12.42□□□□□ -0.42
CSTF3-206ENST00000524827 PLPPR2Q96GM1 343 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 TMEM204Q9BSN7 226 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 STMN4Q9H169 189 aaPredicted RBP12.42□□□□□ -0.42
CSTF3-206ENST00000524827 OR10H1Q9Y4A9 318 aa12.42□□□□□ -0.42
CSTF3-206ENST00000524827 STX16-NPEPL1H3BU86 382 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 LINC01387J3KSC0 135 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 STX16O14662 325 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 RAD51CO43502 376 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 FADS1O60427 444 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 ESRRBO95718 433 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 ALDOAP04075 364 aaKnown RBP12.41□□□□□ -0.42
CSTF3-206ENST00000524827 TYK2P29597 1187 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 SERPINB8P50452 374 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 RPS3AP61247 264 aaKnown RBP12.41□□□□□ -0.42
CSTF3-206ENST00000524827 RPS4XP62701 263 aaKnown RBP12.41□□□□□ -0.42
CSTF3-206ENST00000524827 TRA2BP62995 288 aaKnown RBP12.41□□□□□ -0.42
CSTF3-206ENST00000524827 ZNF155Q12901 538 aaPredicted RBP12.41□□□□□ -0.42
CSTF3-206ENST00000524827 LETMD1Q6P1Q0 360 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 RPS27LQ71UM5 84 aaKnown RBP12.41□□□□□ -0.42
CSTF3-206ENST00000524827 WFDC8Q8IUA0 241 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 OR6K3Q8NGY3 331 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 GFM2Q969S9 779 aaKnown RBP12.41□□□□□ -0.42
CSTF3-206ENST00000524827 EXOSC8Q96B26 276 aaKnown RBP12.41□□□□□ -0.42
CSTF3-206ENST00000524827 HBEGFQ99075 208 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 NAPGQ99747 312 aaPredicted RBP12.41□□□□□ -0.42
CSTF3-206ENST00000524827 RTN4RQ9BZR6 473 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 VPS11Q9H270 941 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 BRF2Q9HAW0 419 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 FLRT3Q9NZU0 649 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 LAMP3Q9UQV4 416 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 EMC9Q9Y3B6 208 aa12.41□□□□□ -0.42
CSTF3-206ENST00000524827 UQCRHLA0A096LP55 91 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 PPP6CO00743 305 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 PLOD3O60568 738 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 IL3P08700 152 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 SLC6A8P48029 635 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 PLTPP55058 493 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 GNG11P61952 73 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 OCRLQ01968 901 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 SGCBQ16585 318 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 PPP4R4Q6NUP7 873 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 OR7G2Q8NG99 324 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 UHMK1Q8TAS1 419 aaKnown RBP12.4□□□□□ -0.42
CSTF3-206ENST00000524827 FBXO25Q8TCJ0 367 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 AKAP1Q92667 903 aaKnown RBP eCLIP12.4□□□□□ -0.42
CSTF3-206ENST00000524827 MTBPQ96DY7 904 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 C1GALT1C1Q96EU7 318 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 REG4Q9BYZ8 158 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 ACTR6Q9GZN1 396 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 PTGES2Q9H7Z7 377 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 SDHAF3Q9NRP4 125 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 PLSCR4Q9NRQ2 329 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 NMRK1Q9NWW6 199 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 XPR1Q9UBH6 696 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 TMCO1Q9UM00 188 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 CLEC4AQ9UMR7 237 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 SNX6Q9UNH7 406 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 ABCG2Q9UNQ0 655 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 CUBNO60494 3623 aa12.4□□□□□ -0.42
CSTF3-206ENST00000524827 SHISA8B8ZZ34 492 aa12.39□□□□□ -0.43
CSTF3-206ENST00000524827 SS18L1O75177 396 aaPredicted RBP12.39□□□□□ -0.43
CSTF3-206ENST00000524827 SMIM24O75264 130 aa12.39□□□□□ -0.43
CSTF3-206ENST00000524827 OTCP00480 354 aa12.39□□□□□ -0.43
CSTF3-206ENST00000524827 PLGP00747 810 aaPredicted RBP12.39□□□□□ -0.43
CSTF3-206ENST00000524827 TP53P04637 393 aaPredicted RBP12.39□□□□□ -0.43
CSTF3-206ENST00000524827 RPS17P08708 135 aaKnown RBP12.39□□□□□ -0.43
CSTF3-206ENST00000524827 RBP1P09455 135 aa12.39□□□□□ -0.43
CSTF3-206ENST00000524827 TSPAN8P19075 237 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms