RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 A0A0J9YY10 115 aa24.03■■□□□ 1.44
COL13A1-213ENST00000520267 KPNA4O00629 521 aaPredicted RBP24.03■■□□□ 1.44
COL13A1-213ENST00000520267 GPX5O75715 221 aa24.03■■□□□ 1.44
COL13A1-213ENST00000520267 IFNGR2P38484 337 aa24.03■■□□□ 1.44
COL13A1-213ENST00000520267 OXA1LQ15070 435 aa24.03■■□□□ 1.44
COL13A1-213ENST00000520267 SPHARQ15513 63 aa24.03■■□□□ 1.44
COL13A1-213ENST00000520267 ZNF836Q6ZNA1 936 aa24.03■■□□□ 1.44
COL13A1-213ENST00000520267 LSRQ86X29 649 aaPredicted RBP24.03■■□□□ 1.44
COL13A1-213ENST00000520267 CYP4Z2PQ8N1L4 340 aa24.03■■□□□ 1.44
COL13A1-213ENST00000520267 TEX47Q8TBZ9 253 aa24.03■■□□□ 1.44
COL13A1-213ENST00000520267 SDF2Q99470 211 aa24.03■■□□□ 1.44
COL13A1-213ENST00000520267 ADAP2Q9NPF8 381 aa24.03■■□□□ 1.44
COL13A1-213ENST00000520267 PRDM9Q9NQV7 894 aa24.03■■□□□ 1.44
COL13A1-213ENST00000520267 STARD5Q9NSY2 213 aa24.03■■□□□ 1.44
COL13A1-213ENST00000520267 C19orf53Q9UNZ5 99 aaPredicted RBP24.03■■□□□ 1.44
COL13A1-213ENST00000520267 TDRD6O60522 2096 aaKnown RBP24.02■■□□□ 1.44
COL13A1-213ENST00000520267 ZSCAN9O15535 394 aaPredicted RBP24.02■■□□□ 1.44
COL13A1-213ENST00000520267 HBQ1P09105 142 aa24.02■■□□□ 1.44
COL13A1-213ENST00000520267 RELAQ04206 551 aa24.02■■□□□ 1.44
COL13A1-213ENST00000520267 TRIM16LQ309B1 348 aa24.02■■□□□ 1.44
COL13A1-213ENST00000520267 KIAA0895LQ68EN5 471 aa24.02■■□□□ 1.44
COL13A1-213ENST00000520267 Q6ZS52 159 aa24.02■■□□□ 1.44
COL13A1-213ENST00000520267 GDF7Q7Z4P5 450 aa24.02■■□□□ 1.44
COL13A1-213ENST00000520267 ZNF438Q7Z4V0 828 aa24.02■■□□□ 1.44
COL13A1-213ENST00000520267 OR52I1Q8NGK6 324 aa24.02■■□□□ 1.44
COL13A1-213ENST00000520267 MND1Q9BWT6 205 aa24.02■■□□□ 1.44
COL13A1-213ENST00000520267 ANKRD19PQ9H560 264 aa24.02■■□□□ 1.44
COL13A1-213ENST00000520267 IL21RQ9HBE5 538 aa24.02■■□□□ 1.44
COL13A1-213ENST00000520267 FUOMA2VDF0 154 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 HCRTR1O43613 425 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 SHC2P98077 582 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 TIMM50Q3ZCQ8 353 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 RRM2BQ7LG56 351 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 TAF8Q7Z7C8 310 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 PEX5LQ8IYB4 626 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 RSC1A1Q92681 617 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 TOE1Q96GM8 510 aaKnown RBP24.01■■□□□ 1.43
COL13A1-213ENST00000520267 SLC41A3Q96GZ6 507 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 TESQ9UGI8 421 aaKnown RBP24.01■■□□□ 1.43
COL13A1-213ENST00000520267 A3GALT2U3KPV4 340 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 FAM221BA6H8Z2 402 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 H3BQ06 376 aaPredicted RBP24.01■■□□□ 1.43
COL13A1-213ENST00000520267 CYR61O00622 381 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 HNRNPCP07910 306 aaKnown RBP eCLIP24.01■■□□□ 1.43
COL13A1-213ENST00000520267 PPP5CP53041 499 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 C1orf61Q13536 156 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 GPR68Q15743 365 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 RNLSQ5VYX0 342 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 SLC27A4Q6P1M0 643 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 RASSF6Q6ZTQ3 369 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 PIGXQ8TBF5 258 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 PIGUQ9H490 435 aa24.01■■□□□ 1.43
COL13A1-213ENST00000520267 NDRG2Q9UN36 371 aaKnown RBP24.01■■□□□ 1.43
COL13A1-213ENST00000520267 UBXN7O94888 489 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 IFNA8P32881 189 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 DECR1Q16698 335 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 MRGPREQ86SM8 312 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 CSNK1A1LQ8N752 337 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 PROKR2Q8NFJ6 384 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 TMEM163Q8TC26 289 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 ACOT11Q8WXI4 607 aaPredicted RBP24■■□□□ 1.43
COL13A1-213ENST00000520267 ZNF232Q9UNY5 417 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 GPR52Q9Y2T5 361 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 KIR2DS5A0A0G2JLQ3 304 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 A0A0G2JNG1 304 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 SPTY2D1-AS1A0A0U1RR47 76 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 KIR2DS3K7RE56 304 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 NT5EP21589 574 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 VSX2P58304 361 aaPredicted RBP24■■□□□ 1.43
COL13A1-213ENST00000520267 FZD2Q14332 565 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 KIR2DS5Q14953 304 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 CA13Q8N1Q1 262 aa24■■□□□ 1.43
COL13A1-213ENST00000520267 DIMT1Q9UNQ2 313 aaKnown RBP24■■□□□ 1.43
COL13A1-213ENST00000520267 AGAP5A6NIR3 686 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 PIP5K1CO60331 668 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 GALR3O60755 368 aaPredicted RBP23.99■■□□□ 1.43
COL13A1-213ENST00000520267 ATP1B1P05026 303 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 THEGLP0DJG4 465 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 CD40LGP29965 261 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 CCR5P51681 352 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 GAS1P54826 345 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 EEF1A1P68104 462 aaKnown RBP23.99■■□□□ 1.43
COL13A1-213ENST00000520267 LARS2Q15031 903 aaKnown RBP23.99■■□□□ 1.43
COL13A1-213ENST00000520267 MAPK14Q16539 360 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 CLEC12AQ5QGZ9 265 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 EXOSC6Q5RKV6 272 aaKnown RBP23.99■■□□□ 1.43
COL13A1-213ENST00000520267 NIPAL1Q6NVV3 410 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 ZNF655Q8N720 491 aaPredicted RBP23.99■■□□□ 1.43
COL13A1-213ENST00000520267 TMEM255BQ8WV15 326 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 PIK3R3Q92569 461 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 FBXO34Q9NWN3 711 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 DOLKQ9UPQ8 538 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 SLCO1B1Q9Y6L6 691 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 RAB36O95755 333 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 GPR75O95800 540 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 TYRP1P17643 537 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 GPR4P46093 362 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 BCAP31P51572 246 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 DUSP8Q13202 625 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 POLR2J2Q9GZM3 115 aaKnown RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms