RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 OR6C2Q9NZP2 312 aa6.47□□□□□ -1.37
SDCBP-208ENST00000520228 GALPQ9UBC7 116 aa6.47□□□□□ -1.37
SDCBP-208ENST00000520228 TINAGQ9UJW2 476 aa6.47□□□□□ -1.37
SDCBP-208ENST00000520228 CORO1CQ9ULV4 474 aaPredicted RBP6.47□□□□□ -1.37
SDCBP-208ENST00000520228 LYVE1Q9Y5Y7 322 aa6.47□□□□□ -1.37
SDCBP-208ENST00000520228 TEX264Q9Y6I9 313 aa6.47□□□□□ -1.37
SDCBP-208ENST00000520228 BPTFQ12830 3046 aa6.47□□□□□ -1.37
SDCBP-208ENST00000520228 DMXL2Q8TDJ6 3036 aa6.47□□□□□ -1.37
SDCBP-208ENST00000520228 ASXL3Q9C0F0 2248 aa6.47□□□□□ -1.37
SDCBP-208ENST00000520228 DSPP15924 2871 aaKnown RBP6.47□□□□□ -1.37
SDCBP-208ENST00000520228 TLCD2A6NGC4 264 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 C2orf74A8MZ97 194 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 E7ESA3 106 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 BTN3A3O00478 584 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 DOK2O60496 412 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 GAGE7O76087 117 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 ZBTB11O95625 1053 aaPredicted RBP6.46□□□□□ -1.38
SDCBP-208ENST00000520228 PRSS2P07478 247 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 GAGE12FP0CL80 117 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 GAGE12GP0CL81 117 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 GAGE12IP0CL82 117 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 IGHV4-30-4P0DP06 118 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 CD82P27701 267 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 PRDX3P30048 256 aaKnown RBP6.46□□□□□ -1.38
SDCBP-208ENST00000520228 ATP5DP30049 168 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 KPNA2P52292 529 aaKnown RBP6.46□□□□□ -1.38
SDCBP-208ENST00000520228 PLTPP55058 493 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 FOXM1Q08050 763 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 GAGE1Q13065 139 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 GAGE4Q13068 117 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 HNRNPA0Q13151 305 aaKnown RBP6.46□□□□□ -1.38
SDCBP-208ENST00000520228 IL11RAQ14626 422 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 FASTKD3Q14CZ7 662 aaKnown RBP6.46□□□□□ -1.38
SDCBP-208ENST00000520228 TRADDQ15628 312 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 KYNUQ16719 465 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 EIF2S3LQ2VIR3 472 aaKnown RBP6.46□□□□□ -1.38
SDCBP-208ENST00000520228 CDONQ4KMG0 1287 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 ACSBG2Q5FVE4 666 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 C8orf74Q6P047 294 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 C19orf48Q6RUI8 117 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 CEACAM20Q6UY09 585 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 ZNF517Q6ZMY9 492 aaPredicted RBP6.46□□□□□ -1.38
SDCBP-208ENST00000520228 IKBIPQ70UQ0 350 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 TAOK1Q7L7X3 1001 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 ZFAND4Q86XD8 727 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 KMT5CQ86Y97 462 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 DCUN1D3Q8IWE4 304 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 CNTN4Q8IWV2 1026 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 ZBED8Q8IZ13 594 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 SIDT2Q8NBJ9 832 aaKnown RBP6.46□□□□□ -1.38
SDCBP-208ENST00000520228 PYROXD1Q8WU10 500 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 NEUROG1Q92886 237 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 RAD51AP1Q96B01 352 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 ELMO2Q96JJ3 720 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 OR6C1Q96RD1 312 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 NDNQ99608 321 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 NRTNQ99748 197 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 ZPBPQ9BS86 351 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 LRRC1Q9BTT6 524 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 POMT2Q9UKY4 750 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 PLAGL1Q9UM63 463 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 DHRS7Q9Y394 339 aa6.46□□□□□ -1.38
SDCBP-208ENST00000520228 TDRD6O60522 2096 aaKnown RBP6.46□□□□□ -1.38
SDCBP-208ENST00000520228 LRP4O75096 1905 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 ITPR1Q14643 2758 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 CTAGE15A4D2H0 777 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 SLC9B1P1A6NJY1 282 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 EIF3HO15372 352 aaKnown RBP eCLIP6.45□□□□□ -1.38
SDCBP-208ENST00000520228 HCRTR2O43614 444 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 VPS26AO75436 327 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 OR2C1O95371 312 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 C1orf105O95561 183 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 CTAGE8P0CG41 777 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 TPBGLP0DKB5 382 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 LIPCP11150 499 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 FOLR1P15328 257 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 CDH3P22223 829 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 SSTR2P30874 369 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 STX2P32856 288 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 RAB28P51157 221 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 UCNP55089 124 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 GUCY2DQ02846 1103 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 ACY1Q03154 408 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 CUL1Q13616 776 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 KIR2DS3Q14952 304 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 TGIF1Q15583 401 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 KLHL38Q2WGJ6 581 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 GGNBP1Q5YKI7 109 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 UGT3A1Q6NUS8 523 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 CYB5D1Q6P9G0 228 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 SPESP1Q6UW49 350 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 C3orf62Q6ZUJ4 267 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 CTAGE6Q86UF2 777 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 CTAGE4Q8IX94 777 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 MMGT1Q8N4V1 131 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 RAB42Q8N4Z0 105 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 C2orf73Q8N5S3 287 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-208ENST00000520228 ZNF114Q8NC26 417 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 FBXO25Q8TCJ0 367 aa6.45□□□□□ -1.38
SDCBP-208ENST00000520228 MAGEC3Q8TD91 643 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms