RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 AMDHD1Q96NU7 426 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 RBM24Q9BX46 236 aaKnown RBP11.26□□□□□ -0.61
CSMD1-205ENST00000519623 C12orf65Q9H3J6 166 aaKnown RBP11.26□□□□□ -0.61
CSMD1-205ENST00000519623 DSN1Q9H410 356 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 PLEKHF2Q9H8W4 249 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 FLRT3Q9NZU0 649 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 SENP1Q9P0U3 644 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 RPH3AQ9Y2J0 694 aaPredicted RBP11.26□□□□□ -0.61
CSMD1-205ENST00000519623 OR10H1Q9Y4A9 318 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 POLR3HQ9Y535 204 aaPredicted RBP11.26□□□□□ -0.61
CSMD1-205ENST00000519623 NIPBLQ6KC79 2804 aaeCLIP11.26□□□□□ -0.61
CSMD1-205ENST00000519623 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 H3BQF6 201 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 COQ9O75208 318 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 GLRA3O75311 464 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 TNFSF13O75888 250 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 SLITRK5O94991 958 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 TCEA1P23193 301 aaKnown RBP11.25□□□□□ -0.61
CSMD1-205ENST00000519623 EVI2BP34910 448 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 CRHR1P34998 444 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 EEF1A1P68104 462 aaKnown RBP11.25□□□□□ -0.61
CSMD1-205ENST00000519623 IMPG1Q17R60 797 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 CCDC153Q494R4 210 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 EEF1A1P5Q5VTE0 462 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 TMEM107Q6UX40 140 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 LUZP2Q86TE4 346 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 GCNT2Q8N0V5 402 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 CHDHQ8NE62 594 aaPredicted RBP11.25□□□□□ -0.61
CSMD1-205ENST00000519623 OR2M3Q8NG83 312 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 OR4K17Q8NGC6 315 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 CDC26Q8NHZ8 85 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 EGLN2Q96KS0 407 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 DACH2Q96NX9 599 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 PIGMQ9H3S5 423 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 OXSMQ9NWU1 459 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 GALNT8Q9NY28 637 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 MED11Q9P086 117 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 DKKL1Q9UK85 242 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 EDARQ9UNE0 448 aa11.25□□□□□ -0.61
CSMD1-205ENST00000519623 FLNAP21333 2647 aaKnown RBP11.24□□□□□ -0.61
CSMD1-205ENST00000519623 A0A1W2PNV4 684 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 NPIPB8E9PQR5 432 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 SCO2O43819 266 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 RSL1D1O76021 490 aaKnown RBP11.24□□□□□ -0.61
CSMD1-205ENST00000519623 IL33O95760 270 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 HRGP04196 525 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 UROSP10746 265 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 PEPDP12955 493 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 CPA3P15088 417 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 KLK2P20151 261 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 PRPH2P23942 346 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 MAP3K8P41279 467 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 CCT5P48643 541 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 SUCLG1P53597 346 aaKnown RBP11.24□□□□□ -0.61
CSMD1-205ENST00000519623 ZNF155Q12901 538 aaPredicted RBP11.24□□□□□ -0.61
CSMD1-205ENST00000519623 SH2D4BQ5SQS7 431 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 PAMR1Q6UXH9 720 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 IKBIPQ70UQ0 350 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 CAMKMTQ7Z624 323 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 GRAMD2AQ8IUY3 354 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 GSPT2Q8IYD1 628 aaKnown RBP11.24□□□□□ -0.61
CSMD1-205ENST00000519623 LRRN4CLQ8ND94 238 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 DUSP19Q8WTR2 217 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 STARD4Q96DR4 205 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 DTNBP1Q96EV8 351 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 METTL2AQ96IZ6 378 aaKnown RBP11.24□□□□□ -0.61
CSMD1-205ENST00000519623 ALPK1Q96QP1 1244 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 LMF2Q9BU23 707 aaKnown RBP11.24□□□□□ -0.61
CSMD1-205ENST00000519623 ACBD3Q9H3P7 528 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 MIEF1Q9NQG6 463 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 RRAGDQ9NQL2 400 aaPredicted RBP11.24□□□□□ -0.61
CSMD1-205ENST00000519623 SDHAF3Q9NRP4 125 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 PPP4R1LQ9P1A2 415 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 ABCG2Q9UNQ0 655 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 ZNF337Q9Y3M9 751 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 NAV3Q8IVL0 2385 aa11.24□□□□□ -0.61
CSMD1-205ENST00000519623 A0A1W2PPR1 153 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 H0YC42 278 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 SEC22BO75396 215 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 GOSR1O95249 250 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 ATE1O95260 518 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 IGKV1D-16P01601 117 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 RAF1P04049 648 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 CRHP06850 196 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 IFI6P09912 130 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 HK1P19367 917 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 NTSP30990 170 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 GABRA3P34903 492 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 TPD52P55327 224 aaPredicted RBP11.23□□□□□ -0.61
CSMD1-205ENST00000519623 DECR1Q16698 335 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 CFAP157Q5JU67 520 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 CLEC6AQ6EIG7 209 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 APOOLQ6UXV4 268 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 Q6ZSR9 355 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 ZNF551Q7Z340 670 aaPredicted RBP11.23□□□□□ -0.61
CSMD1-205ENST00000519623 MARCH3Q86UD3 253 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 TDRPQ86YL5 185 aa11.23□□□□□ -0.61
CSMD1-205ENST00000519623 EIF1ADQ8N9N8 165 aaKnown RBP11.23□□□□□ -0.61
CSMD1-205ENST00000519623 HOXB13Q92826 284 aaPredicted RBP11.23□□□□□ -0.61
CSMD1-205ENST00000519623 Q9N2J8 555 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms