RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PIP5K1BO14986 540 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 SNPHO15079 494 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 FADS1O60427 444 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 ABCB7O75027 752 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 PEX11AO75192 247 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 PSMG1O95456 288 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 CHEK2O96017 543 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 CYP4B1P13584 511 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 COX6B1P14854 86 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 ELAVL4P26378 380 aaKnown RBP8.51□□□□□ -1.05
HDAC3-215ENST00000519474 CEACAM8P31997 349 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-215ENST00000519474 PTGER4P35408 488 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 MC3RP41968 323 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 PSMD7P51665 324 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 ZNF844Q08AG5 666 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 TOMM20Q15388 145 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 GALNTL6Q49A17 601 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 CYP27C1Q4G0S4 372 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 RIPPLY2Q5TAB7 128 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 OR5M10Q6IEU7 315 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 POMZP3Q6PJE2 187 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 TMEM107Q6UX40 140 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 IKBIPQ70UQ0 350 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 LARP4Q71RC2 724 aaKnown RBP eCLIP8.51□□□□□ -1.05
HDAC3-215ENST00000519474 WDR53Q7Z5U6 358 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-215ENST00000519474 PLCZ1Q86YW0 608 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 LURAP1LQ8IV03 231 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 NUDCD3Q8IVD9 361 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 LIX1Q8N485 282 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 CLHC1Q8NHS4 586 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 TWIST2Q8WVJ9 160 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 HOXB13Q92826 284 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-215ENST00000519474 ABTB1Q969K4 478 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-215ENST00000519474 CIDECQ96AQ7 238 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-215ENST00000519474 ZNF764Q96H86 408 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-215ENST00000519474 TSSK3Q96PN8 268 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 CCT7Q99832 543 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 OSBPL11Q9BXB4 747 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 UGT2B28Q9BY64 529 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 RTN4RQ9BZR6 473 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 TRIM8Q9BZR9 551 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 C20orf27Q9GZN8 174 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 VCX3BQ9H321 246 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 EML4Q9HC35 981 aaKnown RBP8.51□□□□□ -1.05
HDAC3-215ENST00000519474 KCNJ16Q9NPI9 418 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 TCF7L2Q9NQB0 619 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 SERHLQ9NQF3 203 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 NPDC1Q9NQX5 325 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-215ENST00000519474 FLRT3Q9NZU0 649 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 NTMQ9P121 344 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 B4GALT7Q9UBV7 327 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 ZNF69Q9UC07 566 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 GIMAP2Q9UG22 337 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 FBXL2Q9UKC9 423 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 MAPRE3Q9UPY8 281 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 MRPS18CQ9Y3D5 142 aaKnown RBP8.51□□□□□ -1.05
HDAC3-215ENST00000519474 UTP20O75691 2785 aaKnown RBP8.51□□□□□ -1.05
HDAC3-215ENST00000519474 C15orf38-AP3S2A0A0A6YYH1 394 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 GXYLT2A0PJZ3 443 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 WDR91A4D1P6 747 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 PRAMEF25A6NGN4 478 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 C17orf51A8MQB3 221 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 RGS16O15492 202 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-215ENST00000519474 SLITRK5O94991 958 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 IGKV1D-16P01601 117 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 IFI6P09912 130 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 DHRS4L1P0CG22 281 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 CPN1P15169 458 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 IGFBP2P18065 325 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 GABRA3P34903 492 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 SERPINB5P36952 375 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 STARP49675 285 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 HCFC1P51610 2035 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 MANFP55145 182 aaKnown RBP8.5□□□□□ -1.05
HDAC3-215ENST00000519474 PDE7AQ13946 482 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 EFR3AQ14156 821 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 KRT71Q3SY84 523 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 XKR7Q5GH72 579 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 C6orf136Q5SQH8 315 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 SH2D4BQ5SQS7 431 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 DCST1Q5T197 706 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 MEX3BQ6ZN04 569 aaKnown RBP8.5□□□□□ -1.05
HDAC3-215ENST00000519474 DDIASQ8IXT1 998 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 TNIP2Q8NFZ5 429 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 FAM110BQ8TC76 370 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 AGR3Q8TD06 166 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 EFHD2Q96C19 240 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-215ENST00000519474 PPCDCQ96CD2 204 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 MTERF3Q96E29 417 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 PPP3R2Q96LZ3 170 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 LMF2Q9BU23 707 aaKnown RBP8.5□□□□□ -1.05
HDAC3-215ENST00000519474 PRDM14Q9GZV8 571 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 KLRF1Q9NZS2 232 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 SENP1Q9P0U3 644 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 ATP6V1HQ9UI12 483 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 CBLCQ9ULV8 474 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 NOSIPQ9Y314 301 aaKnown RBP8.5□□□□□ -1.05
HDAC3-215ENST00000519474 TMED5Q9Y3A6 229 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 OR10H1Q9Y4A9 318 aa8.5□□□□□ -1.05
HDAC3-215ENST00000519474 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms