RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 EGFL7Q9UHF1 273 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 RAB26Q9ULW5 256 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 ERVK-19Q9WJR5 959 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 ENTPD4Q9Y227 616 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 CFL2Q9Y281 166 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 DTNAQ9Y4J8 743 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 CSAG2Q9Y5P2 127 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 C2orf92A0A1B0GVN3 265 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 ELOVL7A1L3X0 281 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 WWP2O00308 870 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 RFXANKO14593 260 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 PRAMEF2O60811 474 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 OR2J2O76002 312 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 SP1P08047 785 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 CT62P0C5K7 136 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 LAMP1P11279 417 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 PLA2G2AP14555 144 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 DDX5P17844 614 aaKnown RBP7.69□□□□□ -1.18
CCL28-204ENST00000514421 PPIBP23284 216 aaKnown RBP7.69□□□□□ -1.18
CCL28-204ENST00000514421 FRKP42685 505 aaPredicted RBP7.69□□□□□ -1.18
CCL28-204ENST00000514421 CDKN2CP42773 168 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 SSR4P51571 173 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 AQP4P55087 323 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 SLC37A1P57057 533 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 MRPS35P82673 323 aaKnown RBP7.69□□□□□ -1.18
CCL28-204ENST00000514421 OR1C1Q15619 314 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 ATP6AP1Q15904 470 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 PRSS53Q2L4Q9 553 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 TRMT12Q53H54 448 aaKnown RBP7.69□□□□□ -1.18
CCL28-204ENST00000514421 ZNF766Q5HY98 468 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 ZNF468Q5VIY5 522 aaPredicted RBP7.69□□□□□ -1.18
CCL28-204ENST00000514421 HLA-DQA1Q5Y7H0 255 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 GLYATQ6IB77 296 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 OR4F3Q6IEY1 312 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 FAM180BQ6P0A1 224 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 R3HCC1LQ7Z5L2 792 aaKnown RBP7.69□□□□□ -1.18
CCL28-204ENST00000514421 C9orf40Q8IXQ3 194 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 GPALPP1Q8IXQ4 340 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 MICU2Q8IYU8 434 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 MARVELD2Q8N4S9 558 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 SLC15A4Q8N697 577 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 NATD1Q8N6N6 113 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 ZNF615Q8N8J6 731 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 ICA1LQ8NDH6 482 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 OR7A2PQ8NGA2 310 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 LRTOMTQ8WZ04 291 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 GFM2Q969S9 779 aaKnown RBP7.69□□□□□ -1.18
CCL28-204ENST00000514421 TP53INP1Q96A56 240 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 CTHRC1Q96CG8 243 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 SNRNP40Q96DI7 357 aaKnown RBP7.69□□□□□ -1.18
CCL28-204ENST00000514421 CENPNQ96H22 339 aaPredicted RBP7.69□□□□□ -1.18
CCL28-204ENST00000514421 NSMCE2Q96MF7 247 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 C5orf34Q96MH7 638 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 SIGLEC12Q96PQ1 595 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 INPP5KQ9BT40 448 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 DUSP26Q9BV47 211 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 REEP4Q9H6H4 257 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 MAGIXQ9H6Y5 334 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 DCAF13Q9NV06 445 aaKnown RBP7.69□□□□□ -1.18
CCL28-204ENST00000514421 ATAD3AQ9NVI7 634 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 ANKRD10Q9NXR5 420 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 MAT2BQ9NZL9 334 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 SH3BP4Q9P0V3 963 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 CORO2BQ9UQ03 480 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 PCDHGA10Q9Y5H3 936 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 PRRC2CQ9Y520 2896 aaKnown RBP7.69□□□□□ -1.18
CCL28-204ENST00000514421 BSNQ9UPA5 3926 aa7.69□□□□□ -1.18
CCL28-204ENST00000514421 POLEQ07864 2286 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 TNRC6AQ8NDV7 1962 aaKnown RBP7.68□□□□□ -1.18
CCL28-204ENST00000514421 NUP214P35658 2090 aaPredicted RBP7.68□□□□□ -1.18
CCL28-204ENST00000514421 A8MVJ9 347 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 J3QKU1 62 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 AKAP10O43572 662 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 PLOD3O60568 738 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 NEURL1O76050 574 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 SLITRK5O94991 958 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 RASAL1O95294 804 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 CLPSP04118 112 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 RPSAP08865 295 aaKnown RBP7.68□□□□□ -1.18
CCL28-204ENST00000514421 RAP2AP10114 183 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 FASP25445 335 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 SSTR4P31391 388 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 ST13P50502 369 aaKnown RBP7.68□□□□□ -1.18
CCL28-204ENST00000514421 NCBP2P52298 156 aaKnown RBP eCLIP7.68□□□□□ -1.18
CCL28-204ENST00000514421 DUSP2Q05923 314 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 VEZF1Q14119 521 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 ADRM1Q16186 407 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 IGFBP7Q16270 282 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 CYP51A1Q16850 503 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 PGS1Q32NB8 556 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 GTDC1Q4AE62 458 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 ZNF628Q5EBL2 1059 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 TBCELQ5QJ74 424 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 CPTPQ5TA50 214 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 ERICH5Q6P6B1 374 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 OPN5Q6U736 354 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 IL20RBQ6UXL0 311 aa7.68□□□□□ -1.18
CCL28-204ENST00000514421 C16orf47Q6ZP98 133 aaPredicted RBP7.68□□□□□ -1.18
CCL28-204ENST00000514421 ZNF551Q7Z340 670 aaPredicted RBP7.68□□□□□ -1.18
CCL28-204ENST00000514421 ZNF227Q86WZ6 799 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms