RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 GLULP15104 373 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 ACVR1BP36896 505 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 GIPRP48546 466 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 OC90Q02509 493 aaPredicted RBP9.07□□□□□ -0.96
VCAN-210ENST00000513960 ZNF628Q5EBL2 1059 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 LINGO2Q7L985 606 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 HORMAD2Q8N7B1 307 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 OR5D16Q8NGK9 328 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 OR56A3Q8NH54 315 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 UCN3Q969E3 161 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 LINC00052Q96N35 136 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 ATF6BQ99941 703 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 B3GNT4Q9C0J1 378 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 OR51V1Q9H2C8 321 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 PHF11Q9UIL8 331 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 CSNK1G3Q9Y6M4 447 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 CDH10Q9Y6N8 788 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 FXYD6-FXYD2A0A087WZ82 144 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 CFDP00746 253 aaPredicted RBP9.07□□□□□ -0.96
VCAN-210ENST00000513960 CTSLP07711 333 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 OR12D1P0DN82 309 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 PIPP12273 146 aaPredicted RBP9.07□□□□□ -0.96
VCAN-210ENST00000513960 CTRB1P17538 263 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 SHC1P29353 583 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 RNF144AP50876 292 aaPredicted RBP9.07□□□□□ -0.96
VCAN-210ENST00000513960 ILKQ13418 452 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 FGL2Q14314 439 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 COL28A1Q2UY09 1125 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 CTRB2Q6GPI1 263 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 PGBD2Q6P3X8 592 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 TMEM81Q6P7N7 255 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 C17orf107Q6ZR85 190 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 LAS2Q8IYD9 372 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 BBS10Q8TAM1 723 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 PAWRQ96IZ0 340 aaKnown RBP9.07□□□□□ -0.96
VCAN-210ENST00000513960 GSDMCQ9BYG8 508 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 FXYD6Q9H0Q3 95 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 DIMT1Q9UNQ2 313 aaKnown RBP9.07□□□□□ -0.96
VCAN-210ENST00000513960 LSM2Q9Y333 95 aaKnown RBP9.07□□□□□ -0.96
VCAN-210ENST00000513960 DOCK6Q96HP0 2047 aa9.07□□□□□ -0.96
VCAN-210ENST00000513960 HIDE1A8MVS5 230 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 SIGLEC5O15389 551 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 KHDRBS3O75525 346 aaKnown RBP9.06□□□□□ -0.96
VCAN-210ENST00000513960 TPPPO94811 219 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 TCRBP04435 133 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 CPEP16870 476 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 FNTBP49356 437 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 VEGFBP49765 207 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 BLVRAP53004 296 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 SMIM11AP58511 58 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 ERVFC1P60507 584 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 TBPL1P62380 186 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 SIGLEC14Q08ET2 396 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 GRM7Q14831 915 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 TECPR1Q7Z6L1 1165 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 RPLP0P6Q8NHW5 317 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 KIAA1143Q96AT1 154 aaPredicted RBP9.06□□□□□ -0.96
VCAN-210ENST00000513960 OTUB2Q96DC9 234 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 SGTBQ96EQ0 304 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 SLC6A18Q96N87 628 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 OR51I1Q9H343 314 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 BRD7Q9NPI1 651 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 GPATCH2Q9NW75 528 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 MGAT4CQ9UBM8 478 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 TNFRSF10DQ9UBN6 386 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 A0A0B4J203 849 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 RNASET2O00584 256 aaKnown RBP9.06□□□□□ -0.96
VCAN-210ENST00000513960 SLC19A2O60779 497 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 TPOP07202 933 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 ZNF8P17098 575 aaPredicted RBP9.06□□□□□ -0.96
VCAN-210ENST00000513960 GABRA5P31644 462 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 MMP12P39900 470 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 GPR1P46091 355 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 OR10A3P58181 314 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 SNRPGP62308 76 aaKnown RBP9.06□□□□□ -0.96
VCAN-210ENST00000513960 NDUFAF5Q5TEU4 345 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 SLC27A4Q6P1M0 643 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 MS4A15Q8N5U1 240 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 MOSPD2Q8NHP6 518 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 TRMT10AQ8TBZ6 339 aaKnown RBP9.06□□□□□ -0.96
VCAN-210ENST00000513960 ZNF480Q8WV37 535 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 CHTF18Q8WVB6 975 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 FAM46AQ96IP4 442 aaKnown RBP9.06□□□□□ -0.96
VCAN-210ENST00000513960 EFCAB11Q9BUY7 163 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 OR2AG1Q9H205 316 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 SLC35C2Q9NQQ7 365 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 FBXW2Q9UKT8 454 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 OBSL1O75147 1896 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 C1orf226A1L170 272 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 FFAR1O14842 300 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 CHST10O43529 356 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 OR5F1O95221 314 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 TIMP1P01033 207 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 EIF4EP06730 217 aaKnown RBP9.06□□□□□ -0.96
VCAN-210ENST00000513960 ITGB7P26010 798 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 PITPNBP48739 271 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 C21orf58P58505 322 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 NTHL1P78549 312 aa9.06□□□□□ -0.96
VCAN-210ENST00000513960 SNTB2Q13425 540 aaKnown RBP9.06□□□□□ -0.96
VCAN-210ENST00000513960 PUM1Q14671 1186 aaKnown RBP eCLIP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms