RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 CBLCQ9ULV8 474 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 FAF1Q9UNN5 650 aaPredicted RBP9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 B3GNT3Q9Y2A9 372 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 NTNG1Q9Y2I2 539 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 ARL2BPQ9Y2Y0 163 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 NDUFAF1Q9Y375 327 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 PCDHB14Q9Y5E9 798 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 CFAP46Q8IYW2 2715 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 CNTRLQ7Z7A1 2325 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 TRBV5-3A0A0A0MS03 114 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 TRAV17A0A0B4J275 112 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 PRAMEF27A3QJZ7 478 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 C3orf80F5H4A9 247 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 MRASO14807 208 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 TO15178 435 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 NDUFB5O43674 189 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 SCO2O43819 266 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 NME2P1O60361 137 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 SORBS2O94875 1100 aaKnown RBP9□□□□□ -0.97
TOPBP1-209ENST00000513818 KCNK2O95069 426 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 UNC5CO95185 931 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 KCNH1O95259 989 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 SP1P08047 785 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 SFTPCP11686 197 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 ETFAP13804 333 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 NME2P22392 152 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 KRT20P35900 424 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 MEOX1P50221 254 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 MVDP53602 400 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 MLLT10P55197 1068 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 MTPNP58546 118 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 IRX1P78414 480 aaPredicted RBP9□□□□□ -0.97
TOPBP1-209ENST00000513818 POU6F2P78424 691 aaPredicted RBP9□□□□□ -0.97
TOPBP1-209ENST00000513818 STX5Q13190 355 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 INPP5JQ15735 1006 aaPredicted RBP9□□□□□ -0.97
TOPBP1-209ENST00000513818 NTRK2Q16620 822 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 DCST2Q5T1A1 773 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 LRIF1Q5T3J3 769 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 SLC25A25Q6KCM7 469 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 PNPLA5Q7Z6Z6 429 aaPredicted RBP9□□□□□ -0.97
TOPBP1-209ENST00000513818 TRIML2Q8N7C3 387 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 GATSQ8NAP1 163 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 CCDC197Q8NCU1 140 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 SPPL2AQ8TCT8 520 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 ADAMTS15Q8TE58 950 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 DIO2Q92813 273 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 HOXB13Q92826 284 aaPredicted RBP9□□□□□ -0.97
TOPBP1-209ENST00000513818 HGDQ93099 445 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 TMEM125Q96AQ2 219 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 HSPBAP1Q96EW2 488 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 COL21A1Q96P44 957 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 TAAR6Q96RI8 345 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 CPPED1Q9BRF8 314 aaPredicted RBP9□□□□□ -0.97
TOPBP1-209ENST00000513818 TSPAN10Q9H1Z9 355 aaPredicted RBP9□□□□□ -0.97
TOPBP1-209ENST00000513818 PIGUQ9H490 435 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 TRIM45Q9H8W5 580 aaPredicted RBP9□□□□□ -0.97
TOPBP1-209ENST00000513818 TPT1P8Q9HAU6 139 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 GALNT9Q9HCQ5 603 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 TIMMDC1Q9NPL8 285 aa9□□□□□ -0.97
TOPBP1-209ENST00000513818 CNOT11Q9UKZ1 510 aaKnown RBP9□□□□□ -0.97
TOPBP1-209ENST00000513818 CHCHD2Q9Y6H1 151 aaPredicted RBP9□□□□□ -0.97
TOPBP1-209ENST00000513818 FAM208BQ5VWN6 2430 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 CENPVL1A0A0U1RR11 272 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 PRAMEF25A6NGN4 478 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 PYCARD-AS1I3L0S3 204 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 FXYD1O00168 92 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 CLIC1O00299 241 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 HMGN4O00479 90 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 NDUFAB1O14561 156 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 GMFGO60234 142 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 ZIC2O95409 532 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 IL33O95760 270 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 KRT16P08779 473 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 COX4I1P13073 169 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 PTGDSP41222 190 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 CRATP43155 626 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 TRPC1P48995 793 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 TMED10P49755 219 aaKnown RBP8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 LRRC74AQ0VAA2 488 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 CYLC2Q14093 348 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 MAPRE2Q15555 327 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 DECR1Q16698 335 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 TRMT5Q32P41 509 aaKnown RBP8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 GRAMD1BQ3KR37 738 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 MMEL1Q495T6 779 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 RPS26P11Q5JNZ5 115 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 GKAP1Q5VSY0 366 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 BHLHB9Q6PI77 547 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 DLEU7Q6UYE1 221 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 PRICKLE2Q7Z3G6 844 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 C16orf62Q7Z3J2 963 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 PACS2Q86VP3 889 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 LSRQ86X29 649 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 HPS6Q86YV9 775 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 SULF2Q8IWU5 870 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 GPALPP1Q8IXQ4 340 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 ZNF843Q8N446 348 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 CISD2Q8N5K1 135 aaKnown RBP8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 SLC15A4Q8N697 577 aa8.99□□□□□ -0.97
TOPBP1-209ENST00000513818 ANKFN1Q8N957 763 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms