RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MAMDC2Q7Z304 686 aaPredicted RBP7.96□□□□□ -1.14
HTT-208ENST00000510626 P2RY13Q9BPV8 354 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 RDH14Q9HBH5 336 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 ZNF623O75123 536 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 INHAP05111 366 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 BDKRB1P46663 353 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 MRPL10Q7Z7H8 261 aaKnown RBP7.96□□□□□ -1.14
HTT-208ENST00000510626 LRRTM4Q86VH4 590 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 IGDCC3Q8IVU1 814 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 GLB1L2Q8IW92 636 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 RGL4Q8IZJ4 473 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 OR5W2Q8NH69 310 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 OR5AK2Q8NH90 309 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 C7orf34Q96L11 122 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 MTHFD2LQ9H903 347 aaPredicted RBP7.96□□□□□ -1.14
HTT-208ENST00000510626 GJB1P08034 283 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 GPR176Q14439 515 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 MINDY4Q4G0A6 757 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 TMPRSS12Q86WS5 348 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 ALG8Q9BVK2 526 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 MSRAQ9UJ68 235 aa7.96□□□□□ -1.14
HTT-208ENST00000510626 HEXBP07686 556 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 ACTR1AP61163 376 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 WDR5P61964 334 aaKnown RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 MTFR2Q6P444 385 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 NPAS4Q8IUM7 802 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 FAM83FQ8NEG4 500 aaPredicted RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 OR7D4Q8NG98 312 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 RAB3CQ96E17 227 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 IMP4Q96G21 291 aaKnown RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 CDK5RAP2Q96SN8 1893 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 FTCDNL1E5RQL4 147 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 PPP1R11O60927 126 aaPredicted RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 SIX3O95343 332 aaPredicted RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 RAC2P15153 192 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 RPL23AP62750 156 aaKnown RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 MFGE8Q08431 387 aaPredicted RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 LRRC25Q8N386 305 aaPredicted RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 KRTCAP2Q8N6L1 136 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 NUMBLQ9Y6R0 609 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 MAGEB4O15481 346 aaPredicted RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 FMO6PO60774 539 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 CERS5Q8N5B7 392 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 SLC30A7Q8NEW0 376 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 NT5C3BQ969T7 300 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 UPRTQ96BW1 309 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 ZBTB20Q9HC78 741 aaPredicted RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 SLC27A5Q9Y2P5 690 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 SCN11AQ9UI33 1791 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 DOCK9Q9BZ29 2069 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 TRPM6Q9BX84 2022 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 SPI1P17947 270 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 EDNRBP24530 442 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 GABRR2P28476 465 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 PSMD8P48556 350 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 RBM39Q14498 530 aaKnown RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 UNC50Q53HI1 259 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 IFNLR1Q8IU57 520 aaPredicted RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 ZDHHC1Q8WTX9 485 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 SLC2A13Q96QE2 648 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 POLDIP3Q9BY77 421 aaKnown RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 ANKRD19PQ9H560 264 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 TMEM100Q9NV29 134 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 FBXL3Q9UKT7 428 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 POLEQ07864 2286 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 IQCF5A8MTL0 148 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 RNF144AP50876 292 aaPredicted RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 TBC1D20Q96BZ9 403 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 TBX5Q99593 518 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 MCHR1Q99705 422 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 GHRLQ9UBU3 117 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 SARDHQ9UL12 918 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 MRPS17Q9Y2R5 130 aaKnown RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 COTL1Q14019 142 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 ADAP2Q9NPF8 381 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 IL36AQ9UHA7 158 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 A0A1W2PQ09 198 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 SMIM6P0DI80 62 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 CFAP52Q8N1V2 620 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 SLAMF9Q96A28 289 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 YJEFN3A6XGL0 299 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 PSMD9O00233 223 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 GIPP09681 153 aaPredicted RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 METTL15P1P0C7V9 234 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 ACP2P11117 423 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 NAT2P11245 290 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 MAN2A2P49641 1150 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 CLRN1P58418 232 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 UPP1Q16831 310 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 FAM205BPQ63HN1 556 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 OR9A4Q8NGU2 314 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 MARVELD3Q96A59 401 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 SORT1Q99523 831 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 NPFFR2Q9Y5X5 522 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 PIK3C2AO00443 1686 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 ZNF35P13682 527 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 ZNF84P51523 738 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 RPS13P62277 151 aaKnown RBP7.95□□□□□ -1.14
HTT-208ENST00000510626 GLO1Q04760 184 aa7.95□□□□□ -1.14
HTT-208ENST00000510626 CXCL9Q07325 125 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms