RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 C20orf27Q9GZN8 174 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 AKTIPQ9H8T0 292 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 MEAF6Q9HAF1 191 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 GALNT9Q9HCQ5 603 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 SPRR3Q9UBC9 169 aa18.14■□□□□ 0.49
SFXN1-209ENST00000508290 CROCCQ5TZA2 2017 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 TRPC5OSA6NMA1 111 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 LAMP1P11279 417 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 CYP4B1P13584 511 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 LBPP18428 481 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 SRD5A2P31213 254 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 GABRA3P34903 492 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 CRYZQ08257 329 aaKnown RBP18.13■□□□□ 0.49
SFXN1-209ENST00000508290 C1orf185Q5T7R7 199 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 VASNQ6EMK4 673 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 OGFOD2Q6N063 350 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 MFSD12Q6NUT3 480 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 SZRD1Q7Z422 152 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 WDSUB1Q8N9V3 476 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 OR7A2PQ8NGA2 310 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 OR4N2Q8NGD1 307 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 GPR151Q8TDV0 419 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 SDCCAG3Q96C92 435 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 TTYH2Q9BSA4 534 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 DUSP26Q9BV47 211 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 PRDM14Q9GZV8 571 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 ZNF395Q9H8N7 513 aaPredicted RBP18.13■□□□□ 0.49
SFXN1-209ENST00000508290 EQTNQ9NQ60 294 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 DUSP22Q9NRW4 184 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 ZCCHC3Q9NUD5 404 aaKnown RBP18.13■□□□□ 0.49
SFXN1-209ENST00000508290 HRH3Q9Y5N1 445 aa18.13■□□□□ 0.49
SFXN1-209ENST00000508290 EXPH5Q8NEV8 1989 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 KLF11O14901 512 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 HDAC3O15379 428 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 SNNO75324 88 aaPredicted RBP18.12■□□□□ 0.49
SFXN1-209ENST00000508290 NGFRP08138 427 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 ALOX5P09917 674 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 TRPC1P48995 793 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 CLNS1AP54105 237 aaKnown RBP18.12■□□□□ 0.49
SFXN1-209ENST00000508290 PRKAG1P54619 331 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 DIO3P55073 304 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 GANABQ14697 944 aaKnown RBP18.12■□□□□ 0.49
SFXN1-209ENST00000508290 SP5Q6BEB4 398 aaPredicted RBP18.12■□□□□ 0.49
SFXN1-209ENST00000508290 AAGABQ6PD74 315 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 ENPP6Q6UWR7 440 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 FAM83FQ8NEG4 500 aaPredicted RBP18.12■□□□□ 0.49
SFXN1-209ENST00000508290 VPS37AQ8NEZ2 397 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 OR8J2Q8NGG1 315 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 SFXN5Q8TD22 340 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 FAM120BQ96EK7 910 aaKnown RBP18.12■□□□□ 0.49
SFXN1-209ENST00000508290 GIMAP5Q96F15 307 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 STACQ99469 402 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 TIMP4Q99727 224 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 G6PC3Q9BUM1 346 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 NUF2Q9BZD4 464 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 PPP4R1LQ9P1A2 415 aa18.12■□□□□ 0.49
SFXN1-209ENST00000508290 FADS1O60427 444 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 NME6O75414 186 aaPredicted RBP18.11■□□□□ 0.49
SFXN1-209ENST00000508290 GAS1P54826 345 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 PMPCAQ10713 525 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.11■□□□□ 0.49
SFXN1-209ENST00000508290 SPDYE7PQ495Y7 208 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 DESI1Q6ICB0 168 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 SPATA19Q7Z5L4 167 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 IFNEQ86WN2 208 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 ULK2Q8IYT8 1036 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 MARVELD2Q8N4S9 558 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 GOLGA6L1Q8N7Z2 621 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 OR14L1PQ8NHC6 308 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 LILRB4Q8NHJ6 448 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 MGARPQ8TDB4 240 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 SLC9A6Q92581 669 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 ABTB1Q969K4 478 aaPredicted RBP18.11■□□□□ 0.49
SFXN1-209ENST00000508290 TESCQ96BS2 214 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 TBL1XR1Q9BZK7 514 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 DPY30Q9C005 99 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 PTGES2Q9H7Z7 377 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 MANSC1Q9H8J5 431 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 VIPAS39Q9H9C1 493 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 SERHLQ9NQF3 203 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 SIRT3Q9NTG7 399 aaPredicted RBP18.11■□□□□ 0.49
SFXN1-209ENST00000508290 FAM215AQ9Y5M1 114 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 SNX8Q9Y5X2 465 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 MYO7BQ6PIF6 2116 aa18.11■□□□□ 0.49
SFXN1-209ENST00000508290 NCOA6Q14686 2063 aaPredicted RBP18.1■□□□□ 0.49
SFXN1-209ENST00000508290 LINC01387J3KSC0 135 aa18.1■□□□□ 0.49
SFXN1-209ENST00000508290 RNASET2O00584 256 aaKnown RBP18.1■□□□□ 0.49
SFXN1-209ENST00000508290 CPN1P15169 458 aa18.1■□□□□ 0.49
SFXN1-209ENST00000508290 KIR3DL1P43629 444 aa18.1■□□□□ 0.49
SFXN1-209ENST00000508290 CCT3P49368 545 aaKnown RBP18.1■□□□□ 0.49
SFXN1-209ENST00000508290 DSCR4P56555 118 aaPredicted RBP18.1■□□□□ 0.49
SFXN1-209ENST00000508290 NUP107P57740 925 aa18.1■□□□□ 0.49
SFXN1-209ENST00000508290 WIPI1Q5MNZ9 446 aaPredicted RBP18.1■□□□□ 0.49
SFXN1-209ENST00000508290 EXOSC6Q5RKV6 272 aaKnown RBP18.1■□□□□ 0.49
SFXN1-209ENST00000508290 RIPPLY2Q5TAB7 128 aa18.1■□□□□ 0.49
SFXN1-209ENST00000508290 ANXA8L1Q5VT79 327 aa18.1■□□□□ 0.49
SFXN1-209ENST00000508290 LACC1Q8IV20 430 aa18.1■□□□□ 0.49
SFXN1-209ENST00000508290 KRTCAP2Q8N6L1 136 aa18.1■□□□□ 0.49
SFXN1-209ENST00000508290 COX18Q8N8Q8 333 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms