RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 FAM109AQ8N4B1 249 aa18.2■□□□□ 0.5
SNX25-204ENST00000506896 SLC16A11Q8NCK7 471 aa18.2■□□□□ 0.5
SNX25-204ENST00000506896 GOT1L1Q8NHS2 421 aaPredicted RBP18.2■□□□□ 0.5
SNX25-204ENST00000506896 JADE3Q92613 823 aa18.2■□□□□ 0.5
SNX25-204ENST00000506896 EFHD2Q96C19 240 aaPredicted RBP18.2■□□□□ 0.5
SNX25-204ENST00000506896 C16orf58Q96GQ5 468 aa18.2■□□□□ 0.5
SNX25-204ENST00000506896 TMEM41AQ96HV5 264 aa18.2■□□□□ 0.5
SNX25-204ENST00000506896 NODALQ96S42 347 aa18.2■□□□□ 0.5
SNX25-204ENST00000506896 GPATCH2Q9NW75 528 aa18.2■□□□□ 0.5
SNX25-204ENST00000506896 KLRF1Q9NZS2 232 aa18.2■□□□□ 0.5
SNX25-204ENST00000506896 TRIM33Q9UPN9 1127 aa18.2■□□□□ 0.5
SNX25-204ENST00000506896 OSGIN2Q9Y236 505 aa18.2■□□□□ 0.5
SNX25-204ENST00000506896 PCDHGB3Q9Y5G1 929 aa18.2■□□□□ 0.5
SNX25-204ENST00000506896 EML6Q6ZMW3 1958 aa18.2■□□□□ 0.5
SNX25-204ENST00000506896 FAM234BA2RU67 622 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 VIMP08670 466 aaKnown RBP18.19■□□□□ 0.5
SNX25-204ENST00000506896 ACP2P11117 423 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 GP1BBP13224 206 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 UQCRC2P22695 453 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 ELAVL4P26378 380 aaKnown RBP18.19■□□□□ 0.5
SNX25-204ENST00000506896 MASP1P48740 699 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 ATP4BP51164 291 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 POLR2JP52435 117 aaKnown RBP18.19■□□□□ 0.5
SNX25-204ENST00000506896 DGKQP52824 942 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 DUSP5Q16690 384 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 C4orf17Q53FE4 359 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 PAOXQ6QHF9 649 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 TRIML2Q8N7C3 387 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 COX18Q8N8Q8 333 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 ADAMTS15Q8TE58 950 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 NTNG2Q96CW9 530 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 PANX1Q96RD7 426 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 OSBPL11Q9BXB4 747 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 TSPAN10Q9H1Z9 355 aaPredicted RBP18.19■□□□□ 0.5
SNX25-204ENST00000506896 PIGUQ9H490 435 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 RMND5AQ9H871 391 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 ZDHHC11Q9H8X9 412 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 QPCTLQ9NXS2 382 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 DCTN4Q9UJW0 460 aa18.19■□□□□ 0.5
SNX25-204ENST00000506896 NUP214P35658 2090 aaPredicted RBP18.19■□□□□ 0.5
SNX25-204ENST00000506896 A0A0G2JND7 137 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 RNF103-CHMP3A0A140T963 221 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 DUXAA6NLW8 204 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 FAM166BA8MTA8 275 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 C9JVG2 144 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 CPSF4O95639 269 aaKnown RBP18.18■□□□□ 0.5
SNX25-204ENST00000506896 LCN1P31025 176 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 KCNK10P57789 538 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 CMPK2Q5EBM0 449 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 BICRALQ6AI39 1079 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 TMEM251Q8N6I4 163 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 OR5AK3PQ8NH89 298 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 RNF138Q8WVD3 245 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 PIK3R3Q92569 461 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 DTNBP1Q96EV8 351 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 THOC1Q96FV9 657 aaKnown RBP18.18■□□□□ 0.5
SNX25-204ENST00000506896 CHMP6Q96FZ7 201 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 RMND5BQ96G75 393 aaPredicted RBP18.18■□□□□ 0.5
SNX25-204ENST00000506896 JSRP1Q96MG2 331 aaPredicted RBP18.18■□□□□ 0.5
SNX25-204ENST00000506896 G6PC3Q9BUM1 346 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 BTBD2Q9BX70 525 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 RABEP2Q9H5N1 569 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 ZNF703Q9H7S9 590 aaPredicted RBP18.18■□□□□ 0.5
SNX25-204ENST00000506896 FGFR1OP2Q9NVK5 253 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 ABCG2Q9UNQ0 655 aa18.18■□□□□ 0.5
SNX25-204ENST00000506896 GXYLT2A0PJZ3 443 aa18.17■□□□□ 0.5
SNX25-204ENST00000506896 LRRC3CA6NJW4 275 aa18.17■□□□□ 0.5
SNX25-204ENST00000506896 ICOSLGO75144 302 aa18.17■□□□□ 0.5
SNX25-204ENST00000506896 CYP4B1P13584 511 aa18.17■□□□□ 0.5
SNX25-204ENST00000506896 CLK3P49761 638 aaKnown RBP18.17■□□□□ 0.5
SNX25-204ENST00000506896 POU6F2P78424 691 aaPredicted RBP18.17■□□□□ 0.5
SNX25-204ENST00000506896 SQLEQ14534 574 aa18.17■□□□□ 0.5
SNX25-204ENST00000506896 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.17■□□□□ 0.5
SNX25-204ENST00000506896 METTL21CQ5VZV1 264 aa18.17■□□□□ 0.5
SNX25-204ENST00000506896 DESI1Q6ICB0 168 aa18.17■□□□□ 0.5
SNX25-204ENST00000506896 C6orf120Q7Z4R8 191 aa18.17■□□□□ 0.5
SNX25-204ENST00000506896 OR52N2Q8NGI0 321 aa18.17■□□□□ 0.5
SNX25-204ENST00000506896 RFWD2Q8NHY2 731 aa18.17■□□□□ 0.5
SNX25-204ENST00000506896 FBXO30Q8TB52 745 aa18.17■□□□□ 0.5
SNX25-204ENST00000506896 FAM110BQ8TC76 370 aa18.17■□□□□ 0.5
SNX25-204ENST00000506896 YIPF4Q9BSR8 244 aa18.17■□□□□ 0.5
SNX25-204ENST00000506896 PLSCR2Q9NRY7 297 aa18.17■□□□□ 0.5
SNX25-204ENST00000506896 CCDC154A6NI56 674 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 LRRTM2O43300 516 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 KCNK2O95069 426 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 AGR2O95994 175 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 MATN1P21941 496 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 EVI2BP34910 448 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 PTGDSP41222 190 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 MAGEA5P43359 124 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 ZFP36L2P47974 494 aaKnown RBP18.16■□□□□ 0.5
SNX25-204ENST00000506896 RFX3P48380 749 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 MAN2A2P49641 1150 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 RCAN2Q14206 197 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 SLC10A1Q14973 349 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 TIGD3Q6B0B8 471 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 ARHGAP11AQ6P4F7 1023 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 OR9I1Q8NGQ6 314 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 OR1J4Q8NGS1 313 aa18.16■□□□□ 0.5
SNX25-204ENST00000506896 MIPOL1Q8TD10 442 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms