RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CLIC1O00299 241 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 LYPD3O95274 346 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 IGHG3P01860 377 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 SOX3P41225 446 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 GABPB1Q06547 395 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 GRAMD1BQ3KR37 738 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC30A6Q6NXT4 461 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 POGLUT1Q8NBL1 392 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 OR4N2Q8NGD1 307 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 RCN3Q96D15 328 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC35G5Q96KT7 338 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 PANX1Q96RD7 426 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 UCN2Q96RP3 112 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 GORASP2Q9H8Y8 452 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 DEPPQ9NTK1 212 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 LHX6Q9UPM6 363 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 PHF3Q92576 2039 aaKnown RBP7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 C9JVG2 144 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 UGT2B17O75795 530 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 OR2J2O76002 312 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 WDPCPO95876 746 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 CYP4B1P13584 511 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 SSR4P51571 173 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 DCST2Q5T1A1 773 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 OPN5Q6U736 354 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 ASB18Q6ZVZ8 466 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC22A8Q8TCC7 542 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC38A5Q8WUX1 472 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 OMA1Q96E52 524 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 HOXD1Q9GZZ0 328 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 CDCP1Q9H5V8 836 aa7.6□□□□□ -1.19
CDC42SE2-208ENST00000505065 AGAP5A6NIR3 686 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 SNPHO15079 494 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 DYRK3O43781 588 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 HPNP05981 417 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 NCF2P19878 526 aaPredicted RBP7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 B3GALT5-AS1P59052 145 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 APOOLQ6UXV4 268 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 NSL1Q96IY1 281 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 ARHGDIGQ99819 225 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 LRMDAQ9H2I8 198 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 FLRT3Q9NZU0 649 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 PRPF19Q9UMS4 504 aaKnown RBP7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 A0A0G2JPF8 293 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 TCRBV5S2A0A599 114 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 HNRNPCL2B2RXH8 293 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 HNRNPCL3B7ZW38 293 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 MRASO14807 208 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 UGT2B11O75310 529 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 C1QL1O75973 258 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 HNRNPCL4P0DMR1 293 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 CNR1P21554 472 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 SUMO3P55854 103 aaPredicted RBP7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 CXADRP78310 365 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 RINLQ6ZS11 566 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 COMTD1Q86VU5 262 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 RNF130Q86XS8 419 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 CDS1Q92903 461 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 DHRS1Q96LJ7 313 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 NODALQ96S42 347 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 FUZQ9BT04 418 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 OR2B2Q9GZK3 357 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 MUC13Q9H3R2 512 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZCCHC3Q9NUD5 404 aaKnown RBP7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZNF835Q9Y2P0 537 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 L3MBTL1Q9Y468 752 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 MYOCOSA0A1B0GUC4 107 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 CLEC18AA5D8T8 446 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 AGRPO00253 132 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 ACOT8O14734 319 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 DPM1O60762 260 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 IGF2P01344 180 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 PTGER1P34995 402 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 GPC1P35052 558 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 CASP3P42574 277 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 NME5P56597 212 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 SKP2Q13309 424 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZNF630Q2M218 657 aaPredicted RBP7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 CLEC18BQ6UXF7 455 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 MISPQ8IVT2 679 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 WDSUB1Q8N9V3 476 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 CLEC18CQ8NCF0 446 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 BBS10Q8TAM1 723 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 G6PC3Q9BUM1 346 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 EFCAB1Q9HAE3 211 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 FBXO34Q9NWN3 711 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 ACAD8Q9UKU7 415 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 HEATR5AQ86XA9 2040 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 SEC16AO15027 2179 aa7.59□□□□□ -1.19
CDC42SE2-208ENST00000505065 SP1P08047 785 aa7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 ALOX5P09917 674 aa7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 PRKAR1BP31321 381 aa7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 FAAH2Q6GMR7 532 aa7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 LINC00114Q6XXX2 140 aa7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 Q6ZPB1 254 aaPredicted RBP7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 TSEN54Q7Z6J9 526 aaKnown RBP7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 PACS2Q86VP3 889 aa7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 TAGAPQ8N103 731 aa7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZNF619Q8N2I2 560 aa7.59□□□□□ -1.2
CDC42SE2-208ENST00000505065 GRHL3Q8TE85 626 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms