RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 NXF5Q9H1B4 397 aaKnown RBP9.62□□□□□ -0.87
TPM3-217ENST00000504663 IL1RAPQ9NPH3 570 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 ASCL3Q9NQ33 180 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 THSD1Q9NS62 852 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 AKAP7Q9P0M2 348 aaPredicted RBP9.62□□□□□ -0.87
TPM3-217ENST00000504663 STOML1Q9UBI4 398 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 RPS6KA6Q9UK32 745 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 NXT1Q9UKK6 140 aaKnown RBP9.62□□□□□ -0.87
TPM3-217ENST00000504663 PADI2Q9Y2J8 665 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 HS3ST3B1Q9Y662 390 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 NPIPA5A0A0B4J1W7 369 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 FRG2CA6NGY1 282 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 CDRT15L2A8MXV6 281 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 C5orf58C9J3I9 102 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 NPIPA7E9PJI5 369 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 DLGAP1O14490 977 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 TO15178 435 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 CLOCKO15516 846 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 SUV39H1O43463 412 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 TPST2O60704 377 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 UGT2B17O75795 530 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 NADKO95544 446 aaPredicted RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 AGR2O95994 175 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 AK1P00568 194 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 FESP07332 822 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 RAB40ALP0C0E4 278 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 PABPC4LP0CB38 370 aaKnown RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 NPIPA8P0DM63 369 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 ZNF26P17031 533 aaPredicted RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 AGXTP21549 392 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 FASP25445 335 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 PIGAP37287 484 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 STAT5AP42229 794 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 SLC26A5P58743 744 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 RPS18P62269 152 aaKnown RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 EEF1A1P68104 462 aaKnown RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 POU6F2P78424 691 aaPredicted RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 CHRNB3Q05901 458 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 NNATQ16517 81 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 OCLNQ16625 522 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.61□□□□□ -0.87
TPM3-217ENST00000504663 FAM98BQ52LJ0 330 aaKnown RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 GPAT3Q53EU6 434 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 IFI44LQ53G44 452 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 FIGNL1Q6PIW4 674 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 PAPD4Q6PIY7 484 aaKnown RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 IGF2-ASQ6U949 168 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 C6orf15Q6UXA7 325 aaPredicted RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 ZNF836Q6ZNA1 936 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 TMPRSS7Q7RTY8 843 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 C16orf62Q7Z3J2 963 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 CPEB2Q7Z5Q1 589 aaKnown RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 PPP1R32Q7Z5V6 425 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 LSRQ86X29 649 aaPredicted RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 VRK2Q86Y07 508 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 RBM45Q8IUH3 476 aaKnown RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 ARMC8Q8IUR7 673 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 ZDHHC21Q8IVQ6 265 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 ZNF619Q8N2I2 560 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 C7orf57Q8NEG2 295 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 B3GNT7Q8NFL0 401 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 DAZLQ92904 295 aaKnown RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 POP5Q969H6 163 aaKnown RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 RMND5BQ96G75 393 aaPredicted RBP9.61□□□□□ -0.87
TPM3-217ENST00000504663 DHRS1Q96LJ7 313 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 IMMP1LQ96LU5 166 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 SLC29A1Q99808 456 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 AMBRA1Q9C0C7 1298 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 WWTR1Q9GZV5 400 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 SEMA6AQ9H2E6 1030 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 EXD2Q9NVH0 621 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 FLRT3Q9NZU0 649 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 NDUFAF4Q9P032 175 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 KCND3Q9UK17 655 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 MKLN1Q9UL63 735 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 AK5Q9Y6K8 562 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 AHCTF1Q8WYP5 2266 aa9.61□□□□□ -0.87
TPM3-217ENST00000504663 IGHV1-45A0A0A0MS14 117 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 AGAP5A6NIR3 686 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 TTC36A6NLP5 189 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 CLDN24A6NM45 220 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 OR6C76A6NM76 312 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 C9J4A7 227 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 hCG_2039718K7EN88 272 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 SYT5O00445 386 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 PEX12O00623 359 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 FFAR1O14842 300 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 PEX1O43933 1283 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 DPM1O60762 260 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 GMNNO75496 209 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 PDE9AO76083 593 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 SEC24DO94855 1032 aaPredicted RBP9.6□□□□□ -0.87
TPM3-217ENST00000504663 DIRAS1O95057 198 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 TNFSF15O95150 251 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 LGI1O95970 557 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 FABP3P05413 133 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 KLK3P07288 261 aaPredicted RBP9.6□□□□□ -0.87
TPM3-217ENST00000504663 CELA2AP08217 269 aa9.6□□□□□ -0.87
TPM3-217ENST00000504663 FCGR1AP12314 374 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms