RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	LSS	P48449	732 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PRIM2	P49643	509 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ANXA11	P50995	505 aa	Known RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CLCN2	P51788	898 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	VSX2	P58304	361 aa	Predicted RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HBA1	P69905	142 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TXNL4A	P83876	142 aa	Known RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CHRNB3	Q05901	458 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RBBP4	Q09028	425 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FADD	Q13158	208 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RGN	Q15493	299 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MUM1	Q2TAK8	710 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TBC1D25	Q3MII6	688 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LINC00303	Q3SY05	128 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SPDYE7P	Q495Y7	208 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GTDC1	Q4AE62	458 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FAM98B	Q52LJ0	330 aa	Known RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TCTE1	Q5JU00	501 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TMTC4	Q5T4D3	741 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	INTS11	Q5TA45	600 aa	Known RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FRMPD2B	Q6IN97	320 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	BHLHB9	Q6PI77	547 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ANGPTL8	Q6UXH0	198 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZNF793	Q6ZN11	406 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325		Q6ZPA2	131 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FKBP9P1	Q75LS8	142 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TMPRSS12	Q86WS5	348 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZNF227	Q86WZ6	799 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SFTPA2	Q8IWL1	248 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLC30A8	Q8IWU4	369 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	EID3	Q8N140	333 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLC25A45	Q8N413	288 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CSNK1A1L	Q8N752	337 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OR52N2	Q8NGI0	321 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CANT1	Q8WVQ1	401 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DNAJC9	Q8WXX5	260 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FIG4	Q92562	907 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NCLN	Q969V3	563 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	EXOSC8	Q96B26	276 aa	Known RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TGM7	Q96PF1	710 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TEFM	Q96QE5	360 aa	Known RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MAP3K3	Q99759	626 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MACROD1	Q9BQ69	325 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLC35A5	Q9BS91	424 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	KLHL4	Q9C0H6	718 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CAAP1	Q9H8G2	361 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CLK4	Q9HAZ1	481 aa	Known RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C3orf14	Q9HBI5	128 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MSL2	Q9HCI7	577 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ANKH	Q9HCJ1	492 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LYRM4	Q9HD34	91 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLC35C2	Q9NQQ7	365 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLC6A13	Q9NSD5	602 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	STARD5	Q9NSY2	213 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	UCKL1	Q9NWZ5	548 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SOHLH2	Q9NX45	425 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	THUMPD1	Q9NXG2	353 aa	Known RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PLA2G3	Q9NZ20	509 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NLGN3	Q9NZ94	848 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PDP2	Q9P2J9	529 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RPS6KA6	Q9UK32	745 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	UTS2R	Q9UKP6	389 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PADI4	Q9UM07	663 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FAF1	Q9UNN5	650 aa	Predicted RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PLCL2	Q9UPR0	1127 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SAMD4A	Q9UPU9	718 aa	Known RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	AURKC	Q9UQB9	309 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RNF215	Q9Y6U7	377 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TDRD6	O60522	2096 aa	Known RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ITPR2	Q14571	2701 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HEATR5B	Q9P2D3	2071 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	POLQ	O75417	2590 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	IGHV1OR21-1	A0A087WYE8	117 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LOC105369274	A0A096LPK9	316 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LOC102723532	A0A0G2JNH3	316 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RNF103-CHMP3	A0A140T963	221 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325		A0A1W2PR48	441 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MAGEA13P	A6NCF6	341 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MYO1G	B0I1T2	1018 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325		H3BNX3	289 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PGRMC2	O15173	223 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	EMC8	O43402	210 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GALR3	O60755	368 aa	Predicted RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	BMP10	O95393	424 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CER1	O95813	267 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	STATH	P02808	62 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LINGO3	P0C6S8	592 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RAP2A	P10114	183 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NR2F6	P10588	404 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	IL1RN	P18510	177 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	EFNA1	P20827	205 aa	Predicted RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	EPHA8	P29322	1005 aa	Predicted RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PPP2R1B	P30154	601 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	KDELR2	P33947	212 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	AVPR1B	P47901	424 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CCT3	P49368	545 aa	Known RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CCT8	P50990	548 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GZMM	P51124	257 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DUSP3	P51452	185 aa	Predicted RBP	4.95	□□□□□ -1.62

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