RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 KIAA0513O60268 411 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 BRINP1O60477 761 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 KCNK2O95069 426 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 LDOC1O95751 146 aaPredicted RBP15.21■□□□□ 0.02
HLA-A-208ENST00000496081 H1F0P07305 194 aaKnown RBP15.21■□□□□ 0.02
HLA-A-208ENST00000496081 ITGAMP11215 1152 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 RPS4Y1P22090 263 aaKnown RBP15.21■□□□□ 0.02
HLA-A-208ENST00000496081 FOXD4Q12950 439 aaPredicted RBP15.21■□□□□ 0.02
HLA-A-208ENST00000496081 MAPK14Q16539 360 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 AP1ARQ63HQ0 302 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 B3GNT8Q7Z7M8 397 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 LAPTM4BQ86VI4 370 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 PRSS58Q8IYP2 241 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 OR9Q2Q8NGE9 314 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 C16orf52Q8NHV5 167 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 RMND5BQ96G75 393 aaPredicted RBP15.21■□□□□ 0.02
HLA-A-208ENST00000496081 SENP5Q96HI0 755 aaPredicted RBP15.21■□□□□ 0.02
HLA-A-208ENST00000496081 PSD2Q9BQI7 771 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 RIBC2Q9H4K1 309 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 CTSFQ9UBX1 484 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 SLC13A4Q9UKG4 626 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 ZNF232Q9UNY5 417 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 MYRFQ9Y2G1 1151 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 HCN4Q9Y3Q4 1203 aa15.21■□□□□ 0.02
HLA-A-208ENST00000496081 CLDN24A6NM45 220 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 A8MUA0 341 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 H3BNH8 94 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 FRS3O43559 492 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 CCNB2O95067 398 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 THBS1P07996 1170 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 SMIM18P0DKX4 95 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 CYP4B1P13584 511 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 ANXA8P13928 327 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 IL7RP16871 459 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 ACP1P24666 158 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 RORAP35398 523 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 GTF2A1P52655 376 aaPredicted RBP15.2■□□□□ 0.02
HLA-A-208ENST00000496081 ZFP36L1Q07352 338 aaKnown RBP15.2■□□□□ 0.02
HLA-A-208ENST00000496081 LARS2Q15031 903 aaKnown RBP15.2■□□□□ 0.02
HLA-A-208ENST00000496081 TTC33Q6PID6 262 aaPredicted RBP15.2■□□□□ 0.02
HLA-A-208ENST00000496081 NPSR1Q6W5P4 371 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 ZNF836Q6ZNA1 936 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 ZAR1Q86SH2 424 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 TMEM151BQ8IW70 566 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 TAGAPQ8N103 731 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 OR4N2Q8NGD1 307 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 RHBDD1Q8TEB9 315 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 GRIP2Q9C0E4 1043 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 VN1R1Q9GZP7 353 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 APMAPQ9HDC9 416 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 POLE3Q9NRF9 147 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 KLHL28Q9NXS3 571 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 FTSJ1Q9UET6 329 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 MKL2Q9ULH7 1088 aa15.2■□□□□ 0.02
HLA-A-208ENST00000496081 NPIPA5A0A0B4J1W7 369 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 A6NHS1 94 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 NPIPA7E9PJI5 369 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 PEX12O00623 359 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 FLRT2O43155 660 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 TPST2O60704 377 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 DBIP07108 87 aaKnown RBP15.19■□□□□ 0.02
HLA-A-208ENST00000496081 GP1BAP07359 652 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 NPIPA8P0DM63 369 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 CT45A8P0DMV1 189 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 CT45A9P0DMV2 189 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 CDH2P19022 906 aaPredicted RBP15.19■□□□□ 0.02
HLA-A-208ENST00000496081 ELAVL4P26378 380 aaKnown RBP15.19■□□□□ 0.02
HLA-A-208ENST00000496081 EEF1A1P68104 462 aaKnown RBP15.19■□□□□ 0.02
HLA-A-208ENST00000496081 NSDHLQ15738 373 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 CT45A2Q5DJT8 189 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 FGD3Q5JSP0 725 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 ZNF770Q6IQ21 691 aaPredicted RBP15.19■□□□□ 0.02
HLA-A-208ENST00000496081 PPP1R3BQ86XI6 285 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 C8orf59Q8N0T1 100 aaPredicted RBP15.19■□□□□ 0.02
HLA-A-208ENST00000496081 ZNF786Q8N393 782 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 ZNF321PQ8N8H1 164 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 OR7G1Q8NGA0 311 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 PMM1Q92871 262 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 CLIP3Q96DZ5 547 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 PRRC1Q96M27 445 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 NIPSNAP1Q9BPW8 284 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 FUZQ9BT04 418 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 PRR14Q9BWN1 585 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 TGIF2Q9GZN2 237 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 CACYBPQ9HB71 228 aaKnown RBP15.19■□□□□ 0.02
HLA-A-208ENST00000496081 PCDHGA8Q9Y5G5 932 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 IGLV3-12A0A075B6K2 115 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 DPPA5A6NC42 116 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 ARRDC5A6NEK1 342 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 UGT2B11O75310 529 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 UGT2B17O75795 530 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 IGKV1D-16P01601 117 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 CBLP22681 906 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 EPHA2P29317 976 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 CSTF2P33240 577 aaKnown RBP eCLIP15.19■□□□□ 0.02
HLA-A-208ENST00000496081 TRHRP34981 398 aaPredicted RBP15.19■□□□□ 0.02
HLA-A-208ENST00000496081 CLK3P49761 638 aaKnown RBP15.19■□□□□ 0.02
HLA-A-208ENST00000496081 SLC37A1P57057 533 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 SMIM11AP58511 58 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 NPRL3Q12980 569 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms