RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 P3H4Q92791 437 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 FAM162AQ96A26 154 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 IL17FQ96PD4 163 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 TAAR6Q96RI8 345 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 CITED2Q99967 270 aaPredicted RBP3.95□□□□□ -1.78
VPS52-222ENST00000495981 FAM118BQ9BPY3 351 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 TBL1YQ9BQ87 522 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 THUMPD3Q9BV44 507 aaKnown RBP3.95□□□□□ -1.78
VPS52-222ENST00000495981 SPRTNQ9H040 489 aaPredicted RBP3.95□□□□□ -1.78
VPS52-222ENST00000495981 VPS37BQ9H9H4 285 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 NHEJ1Q9H9Q4 299 aaPredicted RBP3.95□□□□□ -1.78
VPS52-222ENST00000495981 MRM3Q9HC36 420 aaKnown RBP3.95□□□□□ -1.78
VPS52-222ENST00000495981 OLAHQ9NV23 265 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 NLE1Q9NVX2 485 aaPredicted RBP3.95□□□□□ -1.78
VPS52-222ENST00000495981 EURLQ9NYK6 297 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 OR6C2Q9NZP2 312 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 KLHL20Q9Y2M5 609 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 MRPS2Q9Y399 296 aaKnown RBP3.95□□□□□ -1.78
VPS52-222ENST00000495981 KLK4Q9Y5K2 254 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 CEPT1Q9Y6K0 416 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 AP1M2Q9Y6Q5 423 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 LOC100509620A0A075B734 347 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 IGKV1-8A0A0C4DH67 115 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 A0A0U1RQJ8 604 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 A0A0U1RQK1 487 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 A0A1B0GUH1 482 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 A0A1W2PPV9 198 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 SLC22A23A1A5C7 686 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 MACROD2A1Z1Q3 448 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 ZNF320A2RRD8 509 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 CCDC162PA2VCL2 907 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 A4D1N5 150 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 C2orf81A6NN90 581 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 RNF212BA8MTL3 300 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 INAFM1C9JVW0 142 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 H7C1Q1 480 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 CCL21O00585 134 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 LIN7AO14910 233 aaPredicted RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 ZNHIT1O43257 154 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 OR1I1O60431 355 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 GPC4O75487 556 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 AP2A2O94973 939 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 AP2A1O95782 977 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 HPP00738 406 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 IGHEP01854 428 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 FTH1P02794 183 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 HNRNPCP07910 306 aaKnown RBP eCLIP3.94□□□□□ -1.78
VPS52-222ENST00000495981 CELA2AP08217 269 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 RALBP11234 206 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 ANXA7P20073 488 aaKnown RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 CCR7P32248 378 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 ANP32AP39687 249 aaKnown RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 HNF4AP41235 474 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 BDKRB1P46663 353 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 TNFSF10P50591 281 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 CSE1LP55060 971 aaKnown RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 ACVR1Q04771 509 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 CACNG1Q06432 222 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 FOXI1Q12951 378 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 POU6F1Q14863 301 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 KIR2DS3Q14952 304 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 PRTGQ2VWP7 1150 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 ANKRD20A2Q5SQ80 823 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 C6orf141Q5SZD1 244 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 ANKRD20A1Q5TYW2 823 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 ANKRD20A3Q5VUR7 823 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 MLIPQ5VWP3 458 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 ZNF449Q6P9G9 518 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 C11orf88Q6PI97 169 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 MEX3BQ6ZN04 569 aaKnown RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 SHISA6Q6ZSJ9 500 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 BZW1Q7L1Q6 419 aaKnown RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 NLRP9Q7RTR0 991 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 PID1Q7Z2X4 250 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 CAMKMTQ7Z624 323 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 DCUN1D3Q8IWE4 304 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 TBC1D21Q8IYX1 336 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 ZADH2Q8N4Q0 377 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 AMER3Q8N944 861 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 LRRC57Q8N9N7 239 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 GJC3Q8NFK1 279 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 OR8K1Q8NGG5 319 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 HUS1BQ8NHY5 278 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 ACTRT2Q8TDY3 377 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 TRPC4APQ8TEL6 797 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 HEXDCQ8WVB3 486 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 ELMO1Q92556 727 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.94□□□□□ -1.78
VPS52-222ENST00000495981 PTERQ96BW5 349 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 DAZAP1Q96EP5 407 aaKnown RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 DCUN1D1Q96GG9 259 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 EGLN2Q96KS0 407 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 TMEM68Q96MH6 324 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 RAB3IPQ96QF0 476 aaPredicted RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 FAM110AQ9BQ89 295 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 KRTAP3-1Q9BYR8 98 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 LHPPQ9H008 270 aa3.94□□□□□ -1.78
VPS52-222ENST00000495981 PPIL3Q9H2H8 161 aaKnown RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 COPS7BQ9H9Q2 264 aaPredicted RBP3.94□□□□□ -1.78
VPS52-222ENST00000495981 AGPAT4Q9NRZ5 378 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms