RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ZAR1Q86SH2 424 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 ZFP62Q8NB50 900 aaPredicted RBP17.81■□□□□ 0.44
HDAC4-212ENST00000495497 NR4A3Q92570 626 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 TMCO6Q96DC7 493 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 NEURL3Q96EH8 262 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 ITCHQ96J02 903 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 SECISBP2Q96T21 854 aaKnown RBP17.81■□□□□ 0.44
HDAC4-212ENST00000495497 STACQ99469 402 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 DOHHQ9BU89 302 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 TTTY12Q9BZ98 90 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 OR51I1Q9H343 314 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 KLRF1Q9NZS2 232 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 NUP214P35658 2090 aaPredicted RBP17.81■□□□□ 0.44
HDAC4-212ENST00000495497 GMNCA6NCL1 334 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 PRAMEF25A6NGN4 478 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 NPIPA5E9PKD4 350 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 HS6ST1O60243 411 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 ABCB7O75027 752 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 ANP32DO95626 131 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 PTPN6P29350 595 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 TDGF1P3P51864 188 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 EFR3AQ14156 821 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 TNFAIP8L2Q6P589 184 aaPredicted RBP17.8■□□□□ 0.44
HDAC4-212ENST00000495497 RNF130Q86XS8 419 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 SIAH3Q8IW03 269 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 TRIML2Q8N7C3 387 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 POGLUT1Q8NBL1 392 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 FAM110BQ8TC76 370 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 PNPT1Q8TCS8 783 aaKnown RBP17.8■□□□□ 0.44
HDAC4-212ENST00000495497 SLX1AQ9BQ83 275 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 BTBD2Q9BX70 525 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 PAIP1Q9H074 479 aaKnown RBP17.8■□□□□ 0.44
HDAC4-212ENST00000495497 DUSP22Q9NRW4 184 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 SLAMF8Q9P0V8 285 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 NPIPA1Q9UND3 350 aa17.8■□□□□ 0.44
HDAC4-212ENST00000495497 ANKRD33BA6NCL7 494 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 LRRC3CA6NJW4 275 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 C17orf51A8MQB3 221 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 GNB5O14775 395 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 ZNHIT1O43257 154 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 TRIM3O75382 744 aaPredicted RBP17.79■□□□□ 0.44
HDAC4-212ENST00000495497 GLSO94925 669 aaPredicted RBP17.79■□□□□ 0.44
HDAC4-212ENST00000495497 KRT16P08779 473 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 RFPL3SP0C7P2 107 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 OR12D1P0DN82 309 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 PPIAP62937 165 aaKnown RBP17.79■□□□□ 0.44
HDAC4-212ENST00000495497 MRPL49Q13405 166 aaKnown RBP17.79■□□□□ 0.44
HDAC4-212ENST00000495497 OLIG3Q7RTU3 272 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 SPATA21Q7Z572 469 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 OR52N2Q8NGI0 321 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 ZFP90Q8TF47 636 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 RAB8BQ92930 207 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 NTNG2Q96CW9 530 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 AURKBQ96GD4 344 aaPredicted RBP17.79■□□□□ 0.44
HDAC4-212ENST00000495497 OSBPL11Q9BXB4 747 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 DEFB127Q9H1M4 99 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 IL1RL2Q9HB29 575 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 SAR1AQ9NR31 198 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 TMEM45AQ9NWC5 275 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 GIN1Q9NXP7 522 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 MRTO4Q9UKD2 239 aaKnown RBP17.79■□□□□ 0.44
HDAC4-212ENST00000495497 PCDHB14Q9Y5E9 798 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 HRH3Q9Y5N1 445 aa17.79■□□□□ 0.44
HDAC4-212ENST00000495497 TFECO14948 347 aaPredicted RBP17.78■□□□□ 0.44
HDAC4-212ENST00000495497 SCO2O43819 266 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 FADS1O60427 444 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 UTS2O95399 124 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 CBX6O95503 412 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 UQCRFS1P47985 274 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 TRPC1P48995 793 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 PSMD4P55036 377 aaKnown RBP17.78■□□□□ 0.44
HDAC4-212ENST00000495497 GRAMD1BQ3KR37 738 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 TBCELQ5QJ74 424 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 COX20Q5RI15 118 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 DCST2Q5T1A1 773 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 FNDC7Q5VTL7 733 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 TMEM81Q6P7N7 255 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 CPLX4Q7Z7G2 160 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 TMEM251Q8N6I4 163 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 MIPOL1Q8TD10 442 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 RTN4RQ9BZR6 473 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 ZFP64Q9NPA5 681 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 EML6Q6ZMW3 1958 aa17.78■□□□□ 0.44
HDAC4-212ENST00000495497 NPIPA5A0A0B4J1W7 369 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 A0A1W2PP18 115 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 NPIPA7E9PJI5 369 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 PDE9AO76083 593 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 SNX4O95219 450 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 CELA3AP09093 270 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 ZCCHC18P0CG32 403 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 NPIPA8P0DM63 369 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 EDN3P14138 238 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 HOXB9P17482 250 aaPredicted RBP17.77■□□□□ 0.44
HDAC4-212ENST00000495497 GNLYP22749 145 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 EVI2BP34910 448 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 MAGEA5P43359 124 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 MASP1P48740 699 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 HSF1Q00613 529 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 KLF10Q13118 480 aa17.77■□□□□ 0.44
HDAC4-212ENST00000495497 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms