RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 HTR1EP28566 365 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 GALNSP34059 522 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 DEKP35659 375 aaKnown RBP7.43□□□□□ -1.22
RIF1-211ENST00000494333 PIGAP37287 484 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 RPS19P39019 145 aaKnown RBP7.43□□□□□ -1.22
RIF1-211ENST00000494333 DNASE1L1P49184 302 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 XKP51811 444 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 NR0B1P51843 470 aaKnown RBP7.43□□□□□ -1.22
RIF1-211ENST00000494333 MAPK12P53778 367 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 SLC37A1P57057 533 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 ADRM1Q16186 407 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 ZNF630Q2M218 657 aaPredicted RBP7.43□□□□□ -1.22
RIF1-211ENST00000494333 ZNF791Q3KP31 576 aaPredicted RBP7.43□□□□□ -1.22
RIF1-211ENST00000494333 UNC50Q53HI1 259 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 ZNF678Q5SXM1 525 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 FAM219BQ5XKK7 198 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 OR52E8Q6IFG1 317 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 ARHGAP11AQ6P4F7 1023 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 RGS9BPQ6ZS82 235 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 SLC29A4Q7RTT9 530 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 COMMD6Q7Z4G1 85 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 SLC22A16Q86VW1 577 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 EID3Q8N140 333 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 METTL4Q8N3J2 472 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 SLC15A4Q8N697 577 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 MYRIPQ8NFW9 859 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 FAM57AQ8TBR7 257 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 ACMSDQ8TDX5 336 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 TM4SF18Q96CE8 201 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 GAL3ST4Q96RP7 486 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 HBEGFQ99075 208 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 VKORC1Q9BQB6 163 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 FAM173AQ9BQD7 235 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 TTTY12Q9BZ98 90 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 TXLNGYQ9BZA5 131 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 CHST11Q9NPF2 352 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 NMRK1Q9NWW6 199 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 FETUBQ9UGM5 382 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 DCDC2Q9UHG0 476 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 ZNF225Q9UK10 706 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 CNOT11Q9UKZ1 510 aaKnown RBP7.43□□□□□ -1.22
RIF1-211ENST00000494333 CROCCQ5TZA2 2017 aa7.43□□□□□ -1.22
RIF1-211ENST00000494333 PRRC2CQ9Y520 2896 aaKnown RBP7.43□□□□□ -1.22
RIF1-211ENST00000494333 DOPEY1Q5JWR5 2465 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 MYO7BQ6PIF6 2116 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 DIDO1Q9BTC0 2240 aaKnown RBP7.42□□□□□ -1.22
RIF1-211ENST00000494333 A0A0G2JMM0 328 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 A0A1W2PPB8 328 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 A0A1W2PPM1 405 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 A0A1W2PRS3 328 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 C1orf226A1L170 272 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 KIR3DP1A8MWS1 328 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 FOXO6A8MYZ6 492 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 NPIPA2E9PIF3 369 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 NPIPA3F8WFD2 350 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 ADAM10O14672 748 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 GUCY1B2O75343 617 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 ERAL1O75616 437 aaKnown RBP7.42□□□□□ -1.22
RIF1-211ENST00000494333 CLDN14O95500 239 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 NADKO95544 446 aaPredicted RBP7.42□□□□□ -1.22
RIF1-211ENST00000494333 KRT6AP02538 564 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 KRT6BP04259 564 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 GSTA1P08263 222 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 CT62P0C5K7 136 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 PORP16435 677 aaPredicted RBP7.42□□□□□ -1.22
RIF1-211ENST00000494333 AGAP20933 346 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 NT5EP21589 574 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 ATP5F1P24539 256 aaPredicted RBP7.42□□□□□ -1.22
RIF1-211ENST00000494333 CTSSP25774 331 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 SERPINB3P29508 390 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 HMOX2P30519 316 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 MAGEA5P43359 124 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 KRT6CP48668 564 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 GALNT1Q10472 559 aaPredicted RBP7.42□□□□□ -1.22
RIF1-211ENST00000494333 FOXO1Q12778 655 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 TBL3Q12788 808 aaKnown RBP7.42□□□□□ -1.22
RIF1-211ENST00000494333 ICAM4Q14773 271 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 SLC10A1Q14973 349 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 EBPQ15125 230 aaKnown RBP7.42□□□□□ -1.22
RIF1-211ENST00000494333 RASA2Q15283 850 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 CDSNQ15517 529 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 GXYLT1Q4G148 440 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 TCHHL1Q5QJ38 904 aaPredicted RBP7.42□□□□□ -1.22
RIF1-211ENST00000494333 SLC48A1Q6P1K1 146 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 TMEM64Q6YI46 380 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 LCA5Q86VQ0 697 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 SLC22A9Q8IVM8 553 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 GSPT2Q8IYD1 628 aaKnown RBP7.42□□□□□ -1.22
RIF1-211ENST00000494333 TAGAPQ8N103 731 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 TMEM251Q8N6I4 163 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 C1orf52Q8N6N3 182 aaKnown RBP7.42□□□□□ -1.22
RIF1-211ENST00000494333 OR5M3Q8NGP4 307 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 METTL6Q8TCB7 284 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 UBLCP1Q8WVY7 318 aaPredicted RBP7.42□□□□□ -1.22
RIF1-211ENST00000494333 SPACA9Q96E40 222 aaPredicted RBP7.42□□□□□ -1.22
RIF1-211ENST00000494333 TMEM237Q96Q45 408 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 DMRTA2Q96SC8 542 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 WWTR1Q9GZV5 400 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 ZDHHC11Q9H8X9 412 aa7.42□□□□□ -1.22
RIF1-211ENST00000494333 CXorf21Q9HAI6 301 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms