RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, human

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-208	ENST00000490476	CCDC69	A6NI79	296 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	SLC9B1P1	A6NJY1	282 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	PMS2P5	A8MQ11	134 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	RNF103	O00237	685 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	PRDM1	O75626	825 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	KLF8	O95600	359 aa	Predicted RBP	4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	IGLV2-11	P01706	119 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ALPP	P05187	535 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ERVK-10	P10266	1014 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ALPPL2	P10696	532 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	SKIL	P12757	684 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	AREG	P15514	252 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	AHCY	P23526	432 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CTNNA2	P26232	953 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	QARS	P47897	775 aa	Known RBP	4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CLK1	P49759	484 aa	Known RBP	4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	SRP54	P61011	504 aa	Known RBP	4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	PPP1R8	Q12972	351 aa	Known RBP	4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	GK2	Q14410	553 aa	Predicted RBP	4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	DUSP5	Q16690	384 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	EOGT	Q5NDL2	527 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	C12orf60	Q5U649	245 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ISLR2	Q6UXK2	745 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	PTAR1	Q7Z6K3	402 aa	Predicted RBP	4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	LACC1	Q8IV20	430 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	STH	Q8IWL8	128 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	BATF2	Q8N1L9	274 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	FBXW8	Q8N3Y1	598 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	MARVELD2	Q8N4S9	558 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	RNF149	Q8NC42	400 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	EXOC6	Q8TAG9	804 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	SLC13A3	Q8WWT9	602 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	DYRK2	Q92630	601 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	BPIFA2	Q96DR5	249 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ZNF274	Q96GC6	653 aa	Predicted RBP	4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	UHRF2	Q96PU4	802 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	NTMT1	Q9BV86	223 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	LRRC2	Q9BYS8	371 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	KRT23	Q9C075	422 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	DDX47	Q9H0S4	455 aa	Known RBP	4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	NINJ2	Q9NZG7	142 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	KCNG2	Q9UJ96	466 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	FBXL4	Q9UKA2	621 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ELF5	Q9UKW6	265 aa	Predicted RBP	4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	PROCR	Q9UNN8	238 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	FOXA2	Q9Y261	457 aa	Predicted RBP	4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ETV7	Q9Y603	341 aa		4.21	□□□□□ -1.74
SSX2IP-208	ENST00000490476	IGHV4-4	A0A075B6R2	117 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476		A0A1B0GTQ1	180 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	MAGEB2	O15479	319 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	B4GAT1	O43505	415 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	PRPSAP2	O60256	369 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ZG16	O60844	167 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	SAP30	O75446	220 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CLN5	O75503	358 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	STBD1	O95210	358 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	SEC24A	O95486	1093 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	PRAMEF12	O95522	483 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	EML2	O95834	649 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	PRSS56	P0CW18	603 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	GABRG2	P18507	467 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CHRNB4	P30926	498 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CDKN1A	P38936	164 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	HNRNPF	P52597	415 aa	Known RBP	4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	IST1	P53990	364 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	XG	P55808	180 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	KCNK10	P57789	538 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	OR1D5	P58170	312 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	DEFA6	Q01524	100 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	TLE4	Q04727	773 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	HNRNPA0	Q13151	305 aa	Known RBP	4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	TRA2A	Q13595	282 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CEACAM7	Q14002	265 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ISX	Q2M1V0	245 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	LYPLAL1	Q5VWZ2	237 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	SLC25A47	Q6Q0C1	308 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	MFSD7	Q6UXD7	560 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	B3GLCT	Q6Y288	498 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	TMEM64	Q6YI46	380 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ELMOD1	Q8N336	334 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	RAB42	Q8N4Z0	105 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	LEMD2	Q8NC56	503 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	TRPV3	Q8NET8	790 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	OR13C5	Q8NGS8	318 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	SMAP2	Q8WU79	429 aa	Predicted RBP	4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	C14orf79	Q96F83	325 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ATXN7L3B	Q96GX2	97 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ZNF486	Q96H40	463 aa	Predicted RBP	4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	C2orf48	Q96LS8	159 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CATSPER2	Q96P56	530 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	TSPYL1	Q9H0U9	437 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	C1orf21	Q9H246	121 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	DCLRE1B	Q9H816	532 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	MCCC2	Q9HCC0	563 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	MAN2C1	Q9NTJ4	1040 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	UBQLN2	Q9UHD9	624 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ADAM28	Q9UKQ2	775 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ICAM5	Q9UMF0	924 aa		4.2	□□□□□ -1.74
SSX2IP-208	ENST00000490476	KLF2	Q9Y5W3	355 aa	Predicted RBP	4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms