RNA–Protein interactions for RNA: ENST00000488293.4

MECP2-210, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-210ENST00000488293 LRIG3Q6UXM1 1119 aa12.11□□□□□ -0.47
MECP2-210ENST00000488293 ZNF551Q7Z340 670 aaPredicted RBP12.11□□□□□ -0.47
MECP2-210ENST00000488293 WDR53Q7Z5U6 358 aaPredicted RBP12.11□□□□□ -0.47
MECP2-210ENST00000488293 IFNEQ86WN2 208 aa12.11□□□□□ -0.47
MECP2-210ENST00000488293 TNIP2Q8NFZ5 429 aa12.11□□□□□ -0.47
MECP2-210ENST00000488293 CEP70Q8NHQ1 597 aa12.11□□□□□ -0.47
MECP2-210ENST00000488293 ZBED6CLQ96FA7 236 aaPredicted RBP12.11□□□□□ -0.47
MECP2-210ENST00000488293 LRRC46Q96FV0 321 aa12.11□□□□□ -0.47
MECP2-210ENST00000488293 PPP3R2Q96LZ3 170 aa12.11□□□□□ -0.47
MECP2-210ENST00000488293 SDHAF3Q9NRP4 125 aa12.11□□□□□ -0.47
MECP2-210ENST00000488293 ACSS1Q9NUB1 689 aaPredicted RBP12.11□□□□□ -0.47
MECP2-210ENST00000488293 TAS2R10Q9NYW0 307 aa12.11□□□□□ -0.47
MECP2-210ENST00000488293 SH3BP4Q9P0V3 963 aa12.11□□□□□ -0.47
MECP2-210ENST00000488293 ZNF629Q9UEG4 869 aaPredicted RBP12.11□□□□□ -0.47
MECP2-210ENST00000488293 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.11□□□□□ -0.47
MECP2-210ENST00000488293 BAIAP2L1Q9UHR4 511 aa12.11□□□□□ -0.47
MECP2-210ENST00000488293 FBXL2Q9UKC9 423 aa12.11□□□□□ -0.47
MECP2-210ENST00000488293 ABCG2Q9UNQ0 655 aa12.11□□□□□ -0.47
MECP2-210ENST00000488293 V9GYY5 206 aaPredicted RBP12.11□□□□□ -0.47
MECP2-210ENST00000488293 POLQO75417 2590 aa12.11□□□□□ -0.47
MECP2-210ENST00000488293 MBD3L4A6NDZ8 208 aaPredicted RBP12.1□□□□□ -0.47
MECP2-210ENST00000488293 MBD3L3A6NE82 208 aaPredicted RBP12.1□□□□□ -0.47
MECP2-210ENST00000488293 MBD3L5A6NJ08 208 aaPredicted RBP12.1□□□□□ -0.47
MECP2-210ENST00000488293 TMEM114B3SHH9 223 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 PIP5K1BO14986 540 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 AKAP10O43572 662 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 CREB1P16220 341 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 CHMP24386 653 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 MAPK1P28482 360 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 RPL3P39023 403 aaKnown RBP12.1□□□□□ -0.47
MECP2-210ENST00000488293 PEX19P40855 299 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 ETV4P43268 484 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 CLK3P49761 638 aaKnown RBP12.1□□□□□ -0.47
MECP2-210ENST00000488293 MANFP55145 182 aaKnown RBP12.1□□□□□ -0.47
MECP2-210ENST00000488293 GFRA1P56159 465 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 VPS26BQ4G0F5 336 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 XKR7Q5GH72 579 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 ANKRD26P1Q6NSI1 321 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 AAGABQ6PD74 315 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 ZCCHC23Q6ZST2 131 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 R3HCC1LQ7Z5L2 792 aaKnown RBP12.1□□□□□ -0.47
MECP2-210ENST00000488293 TRIM42Q8IWZ5 723 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 NAXEQ8NCW5 288 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 OR6Y1Q8NGX8 325 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 MBD3L2Q8NHZ7 208 aaPredicted RBP12.1□□□□□ -0.47
MECP2-210ENST00000488293 HOXB13Q92826 284 aaPredicted RBP12.1□□□□□ -0.47
MECP2-210ENST00000488293 CIDECQ96AQ7 238 aaPredicted RBP12.1□□□□□ -0.47
MECP2-210ENST00000488293 TRIB1Q96RU8 372 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 ZNF559Q9BR84 538 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 PARD6BQ9BYG5 372 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 FAM120CQ9NX05 1096 aaKnown RBP12.1□□□□□ -0.47
MECP2-210ENST00000488293 NTMQ9P121 344 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 PPP4R1LQ9P1A2 415 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 DKKL1Q9UK85 242 aa12.1□□□□□ -0.47
MECP2-210ENST00000488293 KDM4EB2RXH2 506 aaPredicted RBP12.09□□□□□ -0.47
MECP2-210ENST00000488293 SYT5O00445 386 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 CTIFO43310 598 aaKnown RBP12.09□□□□□ -0.47
MECP2-210ENST00000488293 KCNH1O95259 989 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 BMP5P22003 454 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 DPP4P27487 766 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 GABRA3P34903 492 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 HPCAL1P37235 193 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 MAP3K8P41279 467 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 ZNF136P52737 540 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 DLX5P56178 289 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 DSCR4P56555 118 aaPredicted RBP12.09□□□□□ -0.47
MECP2-210ENST00000488293 WNT3P56703 355 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 KRTAP10-9P60411 292 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 ZNF844Q08AG5 666 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 MLC1Q15049 377 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 KRT71Q3SY84 523 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 FBXL19-AS1Q494R0 122 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 ATP6AP1LQ52LC2 224 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 ZNF385BQ569K4 471 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 CES4AQ5XG92 561 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 OR5M10Q6IEU7 315 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 POMZP3Q6PJE2 187 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 ARSKQ6UWY0 536 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 FADS6Q8N9I5 356 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 CDRT4Q8N9R6 151 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 RELL2Q8NC24 303 aaPredicted RBP12.09□□□□□ -0.47
MECP2-210ENST00000488293 NUP43Q8NFH3 380 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 OR4K17Q8NGC6 315 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 CLHC1Q8NHS4 586 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 AGR3Q8TD06 166 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 UCN2Q96RP3 112 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 SSU72Q9NP77 194 aaKnown RBP12.09□□□□□ -0.47
MECP2-210ENST00000488293 ATP6V1HQ9UI12 483 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 ZDHHC2Q9UIJ5 367 aa12.09□□□□□ -0.47
MECP2-210ENST00000488293 FOXD3Q9UJU5 478 aaPredicted RBP12.09□□□□□ -0.47
MECP2-210ENST00000488293 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.08□□□□□ -0.48
MECP2-210ENST00000488293 H0Y3Z8 333 aa12.08□□□□□ -0.48
MECP2-210ENST00000488293 RGS16O15492 202 aaPredicted RBP12.08□□□□□ -0.48
MECP2-210ENST00000488293 EMC8O43402 210 aa12.08□□□□□ -0.48
MECP2-210ENST00000488293 SCO2O43819 266 aa12.08□□□□□ -0.48
MECP2-210ENST00000488293 ZIC3O60481 467 aa12.08□□□□□ -0.48
MECP2-210ENST00000488293 PEX11AO75192 247 aa12.08□□□□□ -0.48
MECP2-210ENST00000488293 LYPLA1O75608 230 aaPredicted RBP12.08□□□□□ -0.48
MECP2-210ENST00000488293 NKX2-2O95096 273 aa12.08□□□□□ -0.48
MECP2-210ENST00000488293 IL18BPO95998 194 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms