RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 MC3RP41968 323 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 GSTM5P46439 218 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 CPA2P48052 419 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 DSCR4P56555 118 aaPredicted RBP11.03□□□□□ -0.64
VPS16-208ENST00000487461 MRPS22P82650 360 aaKnown RBP11.03□□□□□ -0.64
VPS16-208ENST00000487461 ZNF155Q12901 538 aaPredicted RBP11.03□□□□□ -0.64
VPS16-208ENST00000487461 KEAP1Q14145 624 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 POU4F3Q15319 338 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 DEFB113Q30KQ7 82 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 CYP27C1Q4G0S4 372 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 SH2D4BQ5SQS7 431 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 TMEM107Q6UX40 140 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 ZYG11AQ6WRX3 759 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 SH2D5Q6ZV89 423 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 GRAMD2AQ8IUY3 354 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 IFT20Q8IY31 132 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 OR2M3Q8NG83 312 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 OR4K17Q8NGC6 315 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 CDC26Q8NHZ8 85 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 STARD4Q96DR4 205 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 DTNBP1Q96EV8 351 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 ACBD3Q9H3P7 528 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 GLIPR2Q9H4G4 154 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 TNFRSF12AQ9NP84 129 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 TAS2R7Q9NYW3 318 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 MED11Q9P086 117 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 SENP1Q9P0U3 644 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 TBK1Q9UHD2 729 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 GRID1Q9ULK0 1009 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 C19orf53Q9UNZ5 99 aaPredicted RBP11.03□□□□□ -0.64
VPS16-208ENST00000487461 POLR3HQ9Y535 204 aaPredicted RBP11.03□□□□□ -0.64
VPS16-208ENST00000487461 NAV3Q8IVL0 2385 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 A0A1W2PNV4 684 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 SH3D21A4FU49 640 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 H0YC42 278 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 COQ9O75208 318 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 GOSR1O95249 250 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 PSMG1O95456 288 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 PEPDP12955 493 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 HOXB4P17483 251 aaPredicted RBP11.02□□□□□ -0.65
VPS16-208ENST00000487461 HK1P19367 917 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 SUCLG1P53597 346 aaKnown RBP11.02□□□□□ -0.65
VPS16-208ENST00000487461 TPD52P55327 224 aaPredicted RBP11.02□□□□□ -0.65
VPS16-208ENST00000487461 EEF1A1P68104 462 aaKnown RBP11.02□□□□□ -0.65
VPS16-208ENST00000487461 FAM27E3Q08E93 113 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 ZNF763Q0D2J5 394 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 EEF1A1P5Q5VTE0 462 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 TRIM46Q7Z4K8 759 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 P4HA3Q7Z4N8 544 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 UBQLNLQ8IYU4 475 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 OR5M1Q8NGP8 315 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 DUSP19Q8WTR2 217 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 FIG4Q92562 907 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 ELP4Q96EB1 424 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 AMDHD1Q96NU7 426 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 SHCBP1LQ9BZQ2 653 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 MYNNQ9NPC7 610 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 MIEF1Q9NQG6 463 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 PPP4R1LQ9P1A2 415 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 PSMC3IPQ9P2W1 217 aaPredicted RBP11.02□□□□□ -0.65
VPS16-208ENST00000487461 PACSIN3Q9UKS6 424 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 ZNF337Q9Y3M9 751 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 CCL27Q9Y4X3 112 aa11.02□□□□□ -0.65
VPS16-208ENST00000487461 PCNX3Q9H6A9 2034 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 MSTNO14793 375 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 CASKO14936 926 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 IL33O95760 270 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 PROCP04070 461 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 CRHP06850 196 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 MYL2P10916 166 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 CD53P19397 219 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 KIR2DL2P43627 348 aaPredicted RBP11.01□□□□□ -0.65
VPS16-208ENST00000487461 DIO3P55073 304 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 STX5Q13190 355 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 KIAA0040Q15053 153 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 DECR1Q16698 335 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 IMPG1Q17R60 797 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 NOXRED1Q6NXP6 359 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 VWA1Q6PCB0 445 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 ZNF474Q6S9Z5 364 aaPredicted RBP11.01□□□□□ -0.65
VPS16-208ENST00000487461 CHMP1BQ7LBR1 199 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 BTLAQ7Z6A9 289 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 MARCH3Q86UD3 253 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 OR2L13Q8N349 312 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 CEP112Q8N8E3 955 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 WFDC11Q8NEX6 87 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 FAM76AQ8TAV0 307 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 CCDC126Q96EE4 140 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 EGLN2Q96KS0 407 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 WFIKKN1Q96NZ8 548 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 RHOXF2Q9BQY4 288 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 LMF2Q9BU23 707 aaKnown RBP11.01□□□□□ -0.65
VPS16-208ENST00000487461 C12orf65Q9H3J6 166 aaKnown RBP11.01□□□□□ -0.65
VPS16-208ENST00000487461 SDHAF3Q9NRP4 125 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 NDRG3Q9UGV2 375 aa11.01□□□□□ -0.65
VPS16-208ENST00000487461 WBP11Q9Y2W2 641 aaKnown RBP11.01□□□□□ -0.65
VPS16-208ENST00000487461 GXYLT2A0PJZ3 443 aa11□□□□□ -0.65
VPS16-208ENST00000487461 OR2M5A3KFT3 312 aa11□□□□□ -0.65
VPS16-208ENST00000487461 SLC22A20A6NK97 555 aa11□□□□□ -0.65
VPS16-208ENST00000487461 TNFRSF21O75509 655 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms