RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 MAGEA10P43363 369 aaPredicted RBP24.43■■□□□ 1.5
HLA-C-208ENST00000487245 TAS2R41P59536 307 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 YPEL5P62699 121 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 TMEM44Q2T9K0 475 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 PRRT3Q5FWE3 981 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 LRRC25Q8N386 305 aaPredicted RBP24.43■■□□□ 1.5
HLA-C-208ENST00000487245 CELF2-AS1Q8N7Q2 184 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 ADAMTS15Q8TE58 950 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 TSACCQ96A04 125 aaPredicted RBP24.43■■□□□ 1.5
HLA-C-208ENST00000487245 RNFT2Q96EX2 444 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 SMIM10Q96HG1 83 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 LRRC72A6NJI9 287 aa24.42■■□□□ 1.5
HLA-C-208ENST00000487245 RGS5O15539 181 aa24.42■■□□□ 1.5
HLA-C-208ENST00000487245 SNRNP200O75643 2136 aaKnown RBP24.42■■□□□ 1.5
HLA-C-208ENST00000487245 CDRT1O95170 752 aa24.42■■□□□ 1.5
HLA-C-208ENST00000487245 ZNF10P21506 573 aaPredicted RBP24.42■■□□□ 1.5
HLA-C-208ENST00000487245 TLX1P31314 330 aaPredicted RBP24.42■■□□□ 1.5
HLA-C-208ENST00000487245 PRKAR1BP31321 381 aa24.42■■□□□ 1.5
HLA-C-208ENST00000487245 LSM11P83369 360 aaKnown RBP eCLIP24.42■■□□□ 1.5
HLA-C-208ENST00000487245 ZNF544Q6NX49 715 aa24.42■■□□□ 1.5
HLA-C-208ENST00000487245 LAX1Q8IWV1 398 aa24.42■■□□□ 1.5
HLA-C-208ENST00000487245 UBQLNLQ8IYU4 475 aa24.42■■□□□ 1.5
HLA-C-208ENST00000487245 FLVCR1-AS1Q8TAF5 88 aa24.42■■□□□ 1.5
HLA-C-208ENST00000487245 SLC35B4Q969S0 331 aa24.42■■□□□ 1.5
HLA-C-208ENST00000487245 MRGPRX1Q96LB2 322 aa24.42■■□□□ 1.5
HLA-C-208ENST00000487245 MUTYHQ9UIF7 546 aa24.42■■□□□ 1.5
HLA-C-208ENST00000487245 SPIN1Q9Y657 262 aaPredicted RBP24.42■■□□□ 1.5
HLA-C-208ENST00000487245 GIMAP1-GIMAP5A0A087WTJ2 511 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 A6NCN8 305 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 FAM170BA6NMN3 283 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 RASGRP1O95267 797 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 TSPAN19P0C672 248 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 GAAP10253 952 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 SLC9A3P48764 834 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 CHRNEQ04844 493 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 ST3GAL3Q11203 375 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 GLYR1Q49A26 553 aaPredicted RBP24.41■■□□□ 1.5
HLA-C-208ENST00000487245 OR4K14Q8NGD5 310 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 OR8D4Q8NGM9 314 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 GIMAP5Q96F15 307 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 MS4A4EQ96PG1 132 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 EGLN3Q9H6Z9 239 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 PLD2O14939 933 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 SEC14L5O43304 696 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 MSL3P1P0C860 447 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 AKT2P31751 481 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 STAT5AP42229 794 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 SRP54P61011 504 aaKnown RBP24.41■■□□□ 1.5
HLA-C-208ENST00000487245 GPR50Q13585 617 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 FAM214AQ32MH5 1076 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 HEPHL1Q6MZM0 1159 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 CDC73Q6P1J9 531 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 KIAA1324Q6UXG2 1013 aaKnown RBP24.41■■□□□ 1.5
HLA-C-208ENST00000487245 QSOX2Q6ZRP7 698 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 PRICKLE2Q7Z3G6 844 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 CAMKVQ8NCB2 501 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 KAT2AQ92830 837 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 KIAA1143Q96AT1 154 aaPredicted RBP24.41■■□□□ 1.5
HLA-C-208ENST00000487245 KCTD7Q96MP8 289 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 OR2A5Q96R48 311 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 TMEM168Q9H0V1 697 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 CACYBPQ9HB71 228 aaKnown RBP24.41■■□□□ 1.5
HLA-C-208ENST00000487245 EQTNQ9NQ60 294 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 KCMF1Q9P0J7 381 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 PLEKHB1Q9UF11 243 aaPredicted RBP24.41■■□□□ 1.5
HLA-C-208ENST00000487245 POU2F3Q9UKI9 436 aa24.41■■□□□ 1.5
HLA-C-208ENST00000487245 A0A1W2PS29 197 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 B3GALT2O43825 422 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 FGF9P31371 208 aaPredicted RBP24.4■■□□□ 1.5
HLA-C-208ENST00000487245 HOXD12P35452 270 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 OMPP47874 163 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 MTNR1AP48039 350 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 OR2B6P58173 313 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 DECR1Q16698 335 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 XKRXQ6PP77 449 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 CD200R1LQ6Q8B3 271 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 FIGLAQ6QHK4 219 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 PRR23CQ6ZRP0 262 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 SPATC1Q76KD6 591 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 ANKK1Q8NFD2 765 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 PIGXQ8TBF5 258 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 MIXL1Q9H2W2 232 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 SEMA4GQ9NTN9 838 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 MED17Q9NVC6 651 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 CA5BQ9Y2D0 317 aa24.4■■□□□ 1.5
HLA-C-208ENST00000487245 H0Y8X5 98 aa24.39■■□□□ 1.5
HLA-C-208ENST00000487245 SSX4O60224 188 aa24.39■■□□□ 1.5
HLA-C-208ENST00000487245 UGT2B7P16662 529 aa24.39■■□□□ 1.5
HLA-C-208ENST00000487245 CARTPTQ16568 116 aa24.39■■□□□ 1.5
HLA-C-208ENST00000487245 ZNF485Q8NCK3 441 aa24.39■■□□□ 1.5
HLA-C-208ENST00000487245 TOR1AIP2Q8NFQ8 470 aa24.39■■□□□ 1.5
HLA-C-208ENST00000487245 CCL4L1Q8NHW4 92 aa24.39■■□□□ 1.5
HLA-C-208ENST00000487245 SLC35A4Q96G79 324 aa24.39■■□□□ 1.5
HLA-C-208ENST00000487245 C8orf33Q9H7E9 229 aaPredicted RBP24.39■■□□□ 1.5
HLA-C-208ENST00000487245 MTHFD2LQ9H903 347 aaPredicted RBP24.39■■□□□ 1.5
HLA-C-208ENST00000487245 PTGFRNQ9P2B2 879 aa24.39■■□□□ 1.5
HLA-C-208ENST00000487245 CARD8Q9Y2G2 431 aa24.39■■□□□ 1.5
HLA-C-208ENST00000487245 CHST2Q9Y4C5 530 aa24.39■■□□□ 1.5
HLA-C-208ENST00000487245 SLC30A4O14863 429 aa24.38■■□□□ 1.49
HLA-C-208ENST00000487245 CCNYL3P0C7X3 344 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms