RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 FAM83HQ6ZRV2 1179 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 C16orf59Q7L2K0 433 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 OTOP2Q7RTS6 562 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 FGD2Q7Z6J4 655 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 GPAT4Q86UL3 456 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 RTN4RL1Q86UN2 441 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 GLCCI1Q86VQ1 547 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 AMIGO1Q86WK6 493 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 LRRC28Q86X40 367 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ADGRG3Q86Y34 549 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 KIF18BQ86Y91 864 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 GRAMD2AQ8IUY3 354 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 GPR65Q8IYL9 337 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 IQCF1Q8N6M8 205 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 LRRC17Q8N6Y2 441 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ZNF366Q8N895 744 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 MORN4Q8NDC4 146 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 GPR156Q8NFN8 814 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 OR2AP1Q8NGE2 309 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 OR5M3Q8NGP4 307 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 OR6K2Q8NGY2 324 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 WDR48Q8TAF3 677 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 LHFPL5Q8TAF8 219 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 BBS10Q8TAM1 723 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 SLC7A13Q8TCU3 470 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 WFDC5Q8TCV5 224 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 RAET1EQ8TD07 263 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ZNF431Q8TF32 576 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 SLC38A5Q8WUX1 472 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 MYLIPQ8WY64 445 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 OR5P2Q8WZ92 322 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 NKD1Q969G9 470 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 UBE2E3Q969T4 207 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 WBP2Q969T9 261 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 CIDECQ96AQ7 238 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 OTULINQ96BN8 352 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 TIFAQ96CG3 184 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 C1GALT1C1Q96EU7 318 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 RNFT2Q96EX2 444 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 WBP1Q96G27 269 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 TMEM169Q96HH4 297 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 TMEM19Q96HH6 336 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 SENP5Q96HI0 755 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 LRR1Q96L50 414 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 PRRC1Q96M27 445 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ZNF578Q96N58 590 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 SORCS2Q96PQ0 1159 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 DIRC2Q96SL1 478 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 PKP4Q99569 1192 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 C17orf62Q9BQA9 187 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 C7orf50Q9BRJ6 194 aaKnown RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 AIFM2Q9BRQ8 373 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ZNF649Q9BS31 505 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 TMEM175Q9BSA9 504 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 RSPO3Q9BXY4 272 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 NLNQ9BYT8 704 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 CPEB1Q9BZB8 566 aaKnown RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 TM6SF2Q9BZW4 377 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ATG10Q9H0Y0 220 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 MED28Q9H204 178 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 KCNN2Q9H2S1 579 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ELAC1Q9H777 363 aaKnown RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 CXorf36Q9H7Y0 433 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ERVMER34-1Q9H9K5 563 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 BCL2L10Q9HD36 194 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 MAN2C1Q9NTJ4 1040 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 MED17Q9NVC6 651 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 MED9Q9NWA0 146 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 LYARQ9NX58 379 aaKnown RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 TMEM161AQ9NX61 479 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 TVP23BQ9NYZ1 205 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 MAT2BQ9NZL9 334 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 TRPM5Q9NZQ8 1165 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 COPZ2Q9P299 210 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 RHCGQ9UBD6 479 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 COMMD3Q9UBI1 195 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 TNFRSF10DQ9UBN6 386 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 TEKT2Q9UIF3 430 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 MBD1Q9UIS9 605 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 FBXW2Q9UKT8 454 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 A4GNTQ9UNA3 340 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 LIPT1Q9Y234 373 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 NCKAP1Q9Y2A7 1128 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 EXOGQ9Y2C4 368 aaKnown RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 NUBP2Q9Y5Y2 271 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 BACE2Q9Y5Z0 518 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 FKBP7Q9Y680 259 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 KCNE2Q9Y6J6 123 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 CSNK1G3Q9Y6M4 447 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 CLCA3PQ9Y6N3 262 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ALPK3Q96L96 1907 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 PLXNA2O75051 1894 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 LOC102723532A0A0G2JNH3 316 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SHISA3A0PJX4 238 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 TSPAN11A1L157 253 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 FAM86C2PA6NEL3 165 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SMLR1H3BR10 107 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 J3QRE1 110 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SYT5O00445 386 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 BTN3A3O00478 584 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 665.6 ms