RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 GABRA3P34903 492 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 ADH7P40394 386 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 FRKP42685 505 aaPredicted RBP11.19□□□□□ -0.62
MSH5-216ENST00000484309 WDR4P57081 412 aaKnown RBP11.19□□□□□ -0.62
MSH5-216ENST00000484309 BST1Q10588 318 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 STX3Q13277 289 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 SNTA1Q13424 505 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 DECR1Q16698 335 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 R3HCC1LQ7Z5L2 792 aaKnown RBP11.19□□□□□ -0.62
MSH5-216ENST00000484309 ULK2Q8IYT8 1036 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 OR14L1PQ8NHC6 308 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 GPR151Q8TDV0 419 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 SLC9A6Q92581 669 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 MTERF3Q96E29 417 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 RMND5BQ96G75 393 aaPredicted RBP11.19□□□□□ -0.62
MSH5-216ENST00000484309 LMF2Q9BU23 707 aaKnown RBP11.19□□□□□ -0.62
MSH5-216ENST00000484309 UGT2B28Q9BY64 529 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 Q9N2J8 555 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 PNPOQ9NVS9 261 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 ATP6V1HQ9UI12 483 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 FBXL2Q9UKC9 423 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 CAMK2AQ9UQM7 478 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 A0A0G2JNJ9 132 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 A0A1W2PRB8 838 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 EMC8O43402 210 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 C6orf47O95873 294 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 IGKV1D-16P01601 117 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 COX6B1P14854 86 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 GRK2P25098 689 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 CHRNB4P30926 498 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 EVI2BP34910 448 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 KIR3DL1P43629 444 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 RPL14P50914 215 aaKnown RBP11.18□□□□□ -0.62
MSH5-216ENST00000484309 GAS1P54826 345 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 MAGOHP61326 146 aaKnown RBP11.18□□□□□ -0.62
MSH5-216ENST00000484309 CYP27C1Q4G0S4 372 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 CPTPQ5TA50 214 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 ACAD11Q709F0 780 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 PLCZ1Q86YW0 608 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 HOMEZQ8IX15 550 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 ASB5Q8WWX0 329 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 JADE3Q92613 823 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 FAM120BQ96EK7 910 aaKnown RBP11.18□□□□□ -0.62
MSH5-216ENST00000484309 GIMAP5Q96F15 307 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 CHMP6Q96FZ7 201 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 C16orf58Q96GQ5 468 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 MS4A4EQ96PG1 132 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 TIMP4Q99727 224 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 NUF2Q9BZD4 464 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 RTN4RQ9BZR6 473 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 AKTIPQ9H8T0 292 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 C3orf14Q9HBI5 128 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 TMBIM4Q9HC24 238 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 CHST11Q9NPF2 352 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 SIRT3Q9NTG7 399 aaPredicted RBP11.18□□□□□ -0.62
MSH5-216ENST00000484309 ACSS1Q9NUB1 689 aaPredicted RBP11.18□□□□□ -0.62
MSH5-216ENST00000484309 ZCCHC3Q9NUD5 404 aaKnown RBP11.18□□□□□ -0.62
MSH5-216ENST00000484309 PPP4R1LQ9P1A2 415 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 Q9UFV3 132 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 DKKL1Q9UK85 242 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 EIF3LQ9Y262 564 aaKnown RBP11.18□□□□□ -0.62
MSH5-216ENST00000484309 SNX8Q9Y5X2 465 aa11.18□□□□□ -0.62
MSH5-216ENST00000484309 GMFGO60234 142 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 FADS1O60427 444 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 CBR3O75828 277 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 IL33O95760 270 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 RPL3P39023 403 aaKnown RBP11.17□□□□□ -0.62
MSH5-216ENST00000484309 DIO3P55073 304 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 PSPHP78330 225 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 MRPS22P82650 360 aaKnown RBP11.17□□□□□ -0.62
MSH5-216ENST00000484309 TP53BP2Q13625 1128 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 DUSP5Q16690 384 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 PGS1Q32NB8 556 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 GRAMD1BQ3KR37 738 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 ACSF3Q4G176 576 aaPredicted RBP11.17□□□□□ -0.62
MSH5-216ENST00000484309 VASNQ6EMK4 673 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 MFSD12Q6NUT3 480 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 FIGNL1Q6PIW4 674 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 SEM1Q6ZVN7 128 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 MARCH3Q86UD3 253 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 MCEMP1Q8IX19 187 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 SLC16A11Q8NCK7 471 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 OR4K17Q8NGC6 315 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 CEP70Q8NHQ1 597 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 RNF138Q8WVD3 245 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 ABTB1Q969K4 478 aaPredicted RBP11.17□□□□□ -0.62
MSH5-216ENST00000484309 OR2B2Q9GZK3 357 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 DSN1Q9H410 356 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 CXorf36Q9H7Y0 433 aa11.17□□□□□ -0.62
MSH5-216ENST00000484309 NOP53Q9NZM5 478 aaKnown RBP11.17□□□□□ -0.62
MSH5-216ENST00000484309 MARCOQ9UEW3 520 aaPredicted RBP11.17□□□□□ -0.62
MSH5-216ENST00000484309 RPH3AQ9Y2J0 694 aaPredicted RBP11.17□□□□□ -0.62
MSH5-216ENST00000484309 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.17□□□□□ -0.62
MSH5-216ENST00000484309 CFLARO15519 480 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 NKX2-2O95096 273 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 KCNH1O95259 989 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 UTS2O95399 124 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 IFI6P09912 130 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 GABRA1P14867 456 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms