RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 CELA3AP09093 270 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 G6PDP11413 515 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 ABCD3P28288 659 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 GPC1P35052 558 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 ADH7P40394 386 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 MAN2A2P49641 1150 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 PSMD4P55036 377 aaKnown RBP9.15□□□□□ -0.94
CPSF4-213ENST00000484112 MANFP55145 182 aaKnown RBP9.15□□□□□ -0.94
CPSF4-213ENST00000484112 MRPS35P82673 323 aaKnown RBP9.15□□□□□ -0.94
CPSF4-213ENST00000484112 PRR5P85299 388 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 LRRC74AQ0VAA2 488 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 PTGR1Q14914 329 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 EXOSC7Q15024 291 aaKnown RBP9.15□□□□□ -0.94
CPSF4-213ENST00000484112 ZNHIT3Q15649 155 aaPredicted RBP9.15□□□□□ -0.94
CPSF4-213ENST00000484112 LTB4RQ15722 352 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 CYP27C1Q4G0S4 372 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 WLSQ5T9L3 541 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 FBXW10Q5XX13 1052 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 RTL6Q6ICC9 239 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 BHLHB9Q6PI77 547 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 TMEM64Q6YI46 380 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 FAM47EQ6ZV65 393 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 TRILQ7L0X0 811 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 WDR75Q8IWA0 830 aaKnown RBP9.15□□□□□ -0.94
CPSF4-213ENST00000484112 FAM109AQ8N4B1 249 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 ARFGAP2Q8N6H7 521 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 TMEM251Q8N6I4 163 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 VPS37AQ8NEZ2 397 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 OR7G2Q8NG99 324 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 OR8J2Q8NGG1 315 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 ACTRT2Q8TDY3 377 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 DYDC1Q8WWB3 177 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 STON2Q8WXE9 905 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 HOXB13Q92826 284 aaPredicted RBP9.15□□□□□ -0.94
CPSF4-213ENST00000484112 TESCQ96BS2 214 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 SLC35A4Q96G79 324 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 MAELQ96JY0 434 aaKnown RBP9.15□□□□□ -0.94
CPSF4-213ENST00000484112 ITPAQ9BY32 194 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 NUF2Q9BZD4 464 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 ZDHHC11Q9H8X9 412 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 IL1RL2Q9HB29 575 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 RASSF1Q9NS23 344 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 INTS9Q9NV88 658 aaKnown RBP9.15□□□□□ -0.94
CPSF4-213ENST00000484112 PNPOQ9NVS9 261 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 GIN1Q9NXP7 522 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 QPCTLQ9NXS2 382 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 CRIM1Q9NZV1 1036 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 BAIAP2L1Q9UHR4 511 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 EDARQ9UNE0 448 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 CHCHD2Q9Y6H1 151 aaPredicted RBP9.15□□□□□ -0.94
CPSF4-213ENST00000484112 SPG11Q96JI7 2443 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 A0A1W2PRB8 838 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 OR14I1A6ND48 311 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 UPK1AO00322 258 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 SDHDO14521 159 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 AKAP10O43572 662 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 ZNF354AO60765 605 aaPredicted RBP9.14□□□□□ -0.95
CPSF4-213ENST00000484112 ERN1O75460 977 aaKnown RBP9.14□□□□□ -0.95
CPSF4-213ENST00000484112 SASH3O75995 380 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 LRATO95237 230 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 KRT16P08779 473 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 CT45A8P0DMV1 189 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 CT45A9P0DMV2 189 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 KRT20P35900 424 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 MC3RP41968 323 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 DNASE1L1P49184 302 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 PNLIPRP2P54317 469 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 ADAM8P78325 824 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 PLCXD2Q0VAA5 305 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 DUSP8Q13202 625 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 EFR3AQ14156 821 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 SLC10A1Q14973 349 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 PRSS53Q2L4Q9 553 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 SLC25A35Q3KQZ1 300 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 HSP90B2PQ58FF3 399 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 CT45A2Q5DJT8 189 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 C1orf185Q5T7R7 199 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 ANXA8L1Q5VT79 327 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 SLC30A6Q6NXT4 461 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 FAM180BQ6P0A1 224 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 TMEM107Q6UX40 140 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 CDC20BQ86Y33 519 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 CDRT4Q8N9R6 151 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 GLB1L3Q8NCI6 653 aaPredicted RBP9.14□□□□□ -0.95
CPSF4-213ENST00000484112 SPPL2AQ8TCT8 520 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 OR5P2Q8WZ92 322 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 KAT2AQ92830 837 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 GFM2Q969S9 779 aaKnown RBP9.14□□□□□ -0.95
CPSF4-213ENST00000484112 SARAFQ96BY9 339 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 TMCO6Q96DC7 493 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 MAGEB18Q96M61 343 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 MS4A4EQ96PG1 132 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 SIKE1Q9BRV8 207 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 LMF2Q9BU23 707 aaKnown RBP9.14□□□□□ -0.95
CPSF4-213ENST00000484112 C1orf50Q9BV19 199 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 DUSP26Q9BV47 211 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 ANGPTL4Q9BY76 406 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 DPY30Q9C005 99 aa9.14□□□□□ -0.95
CPSF4-213ENST00000484112 NXF5Q9H1B4 397 aaKnown RBP9.14□□□□□ -0.95
CPSF4-213ENST00000484112 FOLH1BQ9HBA9 442 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms