RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 TMEM114B3SHH9 223 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 UBFD1O14562 309 aaKnown RBP13.05□□□□□ -0.32
ATG4B-218ENST00000479554 CRCPO75575 148 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 CBR3O75828 277 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 FREM3P0C091 2139 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 CT45A8P0DMV1 189 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 CT45A9P0DMV2 189 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 DDCP20711 480 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 MPIP34949 423 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 KIR2DL3P43628 341 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 SLC1A6P48664 564 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 ZNF136P52737 540 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 FOXA1P55317 472 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 CORO7P57737 925 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 NAA20P61599 178 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 PSPHP78330 225 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 ZNF155Q12901 538 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-218ENST00000479554 EFR3AQ14156 821 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 TESK1Q15569 626 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 CEBPEQ15744 281 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 CT45A2Q5DJT8 189 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 CFAP157Q5JU67 520 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 LIPMQ5VYY2 423 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 C6orf89Q6UWU4 347 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 FRMD7Q6ZUT3 714 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 OR6Y1Q8NGX8 325 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 RNASE6Q93091 150 aaKnown RBP13.05□□□□□ -0.32
ATG4B-218ENST00000479554 DTNBP1Q96EV8 351 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 C11orf24Q96F05 449 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-218ENST00000479554 VSTM2LQ96N03 204 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 ADOQ96SZ5 270 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 OR2B2Q9GZK3 357 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 FOLH1BQ9HBA9 442 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 MIEF1Q9NQG6 463 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 SIRT5Q9NXA8 310 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 WIF1Q9Y5W5 379 aa13.05□□□□□ -0.32
ATG4B-218ENST00000479554 MBD3L4A6NDZ8 208 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-218ENST00000479554 MBD3L3A6NE82 208 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-218ENST00000479554 MBD3L5A6NJ08 208 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-218ENST00000479554 SYT5O00445 386 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 PLOD3O60568 738 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 TSPAN2O60636 221 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 COQ9O75208 318 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 NME6O75414 186 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-218ENST00000479554 CYP4B1P13584 511 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 NTSP30990 170 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 DNAJB13P59910 316 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 ABCE1P61221 599 aaKnown RBP13.04□□□□□ -0.32
ATG4B-218ENST00000479554 C2orf80Q0P641 193 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 SNTB1Q13884 538 aaKnown RBP13.04□□□□□ -0.32
ATG4B-218ENST00000479554 FBXL19-AS1Q494R0 122 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 GLIPR1L2Q4G1C9 344 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 ENPP6Q6UWR7 440 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 NPSR1Q6W5P4 371 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 ZCCHC23Q6ZST2 131 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 LARP4Q71RC2 724 aaKnown RBP eCLIP13.04□□□□□ -0.32
ATG4B-218ENST00000479554 IFNEQ86WN2 208 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 PLCZ1Q86YW0 608 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 SLC44A2Q8IWA5 706 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-218ENST00000479554 WDSUB1Q8N9V3 476 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 OR7G2Q8NG99 324 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 MBD3L2Q8NHZ7 208 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-218ENST00000479554 CALHM2Q9HA72 323 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 DNAJB12Q9NXW2 375 aaKnown RBP13.04□□□□□ -0.32
ATG4B-218ENST00000479554 TAS2R10Q9NYW0 307 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 TAS2R9Q9NYW1 312 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 DKKL1Q9UK85 242 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 OR10H1Q9Y4A9 318 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 USH1CQ9Y6N9 552 aa13.04□□□□□ -0.32
ATG4B-218ENST00000479554 ANKHD1Q8IWZ3 2542 aaKnown RBP13.04□□□□□ -0.32
ATG4B-218ENST00000479554 HRNRQ86YZ3 2850 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-218ENST00000479554 CCT8L1PA6NM43 557 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 MYO1GB0I1T2 1018 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 EEF1E1-BLOC1S5C9J1V9 151 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 H0Y3Z8 333 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 EEF1E1O43324 174 aaKnown RBP13.03□□□□□ -0.32
ATG4B-218ENST00000479554 SLITRK5O94991 958 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 JUNP05412 331 aaKnown RBP13.03□□□□□ -0.32
ATG4B-218ENST00000479554 CTSSP25774 331 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 SRD5A2P31213 254 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 SERPINB5P36952 375 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 NCBP2P52298 156 aaKnown RBP eCLIP13.03□□□□□ -0.322e-8■■■■■ 28.7
ATG4B-218ENST00000479554 PNLIPRP2P54317 469 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 SF3A3Q12874 501 aaKnown RBP eCLIP13.03□□□□□ -0.324e-8■■■■□ 25.4
ATG4B-218ENST00000479554 FLYWCH1Q4VC44 716 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 FAM71E1Q6IPT2 247 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 SPNS3Q6ZMD2 512 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 ZPLD1Q8TCW7 415 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 C10orf82Q8WW14 230 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 EFHD2Q96C19 240 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-218ENST00000479554 SIKE1Q9BRV8 207 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 GATA5Q9BWX5 397 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-218ENST00000479554 NPHS2Q9NP85 383 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 MYNNQ9NPC7 610 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 CRIM1Q9NZV1 1036 aa13.03□□□□□ -0.32
ATG4B-218ENST00000479554 FOXD3Q9UJU5 478 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-218ENST00000479554 POLR3HQ9Y535 204 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-218ENST00000479554 KIAA1549Q9HCM3 1950 aa13.02□□□□□ -0.32
ATG4B-218ENST00000479554 A0A087WV62 115 aa13.02□□□□□ -0.33
ATG4B-218ENST00000479554 CTAG2O75638 210 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms