RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 PNPOQ9NVS9 261 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 SIRT5Q9NXA8 310 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 RABL2AQ9UBK7 228 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-209ENST00000479532 CTSFQ9UBX1 484 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 C3orf18Q9UK00 162 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 MYRFQ9Y2G1 1151 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 MMACHCQ9Y4U1 282 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 GPR45Q9Y5Y3 372 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 SPTBP11277 2137 aa5.78□□□□□ -1.48
SF3B1-209ENST00000479532 SPTBN4Q9H254 2564 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 GOLGA8QA0A0J9YX86 632 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 ATP6AP2A0A1C7CYW4 349 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 GOLGA8OA6NCC3 632 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 C4orf51C9J302 202 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 GOLGA8NF8WBI6 632 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 H0YC42 278 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 M0QX08 132 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 HRKO00198 91 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 EDF1O60869 148 aaKnown RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 B4GALT2O60909 372 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 CTNSO60931 367 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 SEMA7AO75326 666 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 ALOX12BO75342 701 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 EEDO75530 441 aaKnown RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 JRKO75564 520 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 ATP6AP2O75787 350 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 CDC123O75794 336 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 CIB2O75838 187 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 IL33O95760 270 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 GBAP04062 536 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 TFAP2AP05549 437 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 SMIM18P0DKX4 95 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 C8orf89P0DMQ9 161 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 T-ENOLP0DO92 83 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 UBL4AP11441 157 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 COX7A2P14406 83 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 CDH2P19022 906 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 PIK3R1P27986 724 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 ARRB2P32121 409 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 OTX2P32243 289 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 HPCAL1P37235 193 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 ALDH9A1P49189 494 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 MTNR1BP49286 362 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 PCYT1AP49585 367 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 RRADP55042 308 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 TPD52P55327 224 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 HSD17B7P56937 341 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 TAS2R50P59544 299 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 STX1BP61266 288 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 RPS18P62269 152 aaKnown RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 ERVK-8P63133 956 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 EMX2Q04743 252 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 FOXD4Q12950 439 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 RUNX2Q13950 521 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 ERV3-1Q14264 604 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 RPS6KA2Q15349 733 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 NSDHLQ15738 373 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 UGT3A2Q3SY77 523 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 XKR7Q5GH72 579 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 C6orf10Q5SRN2 563 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 CES4AQ5XG92 561 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 SIGIRRQ6IA17 410 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 LCN10Q6JVE6 187 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 NOXRED1Q6NXP6 359 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 UGT2A3Q6UWM9 527 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 IZUMO2Q6UXV1 221 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 DCDC5Q6ZRR9 648 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 SHISA6Q6ZSJ9 500 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 IKBIPQ70UQ0 350 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 R3HCC1LQ7Z5L2 792 aaKnown RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 SPATA19Q7Z5L4 167 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 SLC51BQ86UW2 128 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 SAMD14Q8IZD0 417 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 SPARTQ8N0X7 666 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 CPSF7Q8N684 471 aaKnown RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 VPS37AQ8NEZ2 397 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 TOR1AIP2Q8NFQ8 470 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 CEP70Q8NHQ1 597 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 C10orf82Q8WW14 230 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 THAP4Q8WY91 577 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 MCUR1Q96AQ8 359 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 HSPBAP1Q96EW2 488 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 PPP1R36Q96LQ0 422 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 FER1L6-AS2Q96M78 137 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 DGAT2Q96PD7 388 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 MAPKAP1Q9BPZ7 522 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 AIFM2Q9BRQ8 373 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 PELOQ9BRX2 385 aaKnown RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 SORBS1Q9BX66 1292 aaKnown RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 EBPLQ9BY08 206 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 AICDAQ9GZX7 198 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 ZNF552Q9H707 407 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 AKIRIN1Q9H9L7 192 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 SLCO1B3Q9NPD5 702 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 SLC22A11Q9NSA0 550 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 MRGBPQ9NV56 204 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 CNOT11Q9UKZ1 510 aaKnown RBP5.77□□□□□ -1.49
SF3B1-209ENST00000479532 ERVK-11Q9UQG0 969 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 ENTPD4Q9Y227 616 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 POLR3HQ9Y535 204 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms