RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 TRMT61BQ9BVS5 477 aaKnown RBP23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 C1QTNF2Q9BXJ5 285 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 APOBEC3BQ9UH17 382 aaKnown RBP23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 STON1Q9Y6Q2 735 aa23.04■■□□□ 1.28
SYNGAP1-206ENST00000479510 MYO10Q9HD67 2058 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 TBC1D3KA0A087X1G2 549 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 TBC1D3FA6NER0 549 aaPredicted RBP23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 B4DXG7 233 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 CASKO14936 926 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 APOL3O95236 402 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 KAT7O95251 611 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 C8orf89P0DMQ9 161 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 TRHRP34981 398 aaPredicted RBP23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 FGL2Q14314 439 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 TBRG1Q3YBR2 411 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 TBC1D3GQ6DHY5 549 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 MZT2AQ6P582 158 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 HDDC3Q8N4P3 179 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 FBXL6Q8N531 539 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 SLC7A6Q92536 515 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 GAL3ST3Q96A11 431 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 FRMD6Q96NE9 622 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 MS4A4EQ96PG1 132 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 MCHR1Q99705 422 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 MACROD1Q9BQ69 325 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 PPP1R3EQ9H7J1 279 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 RNF121Q9H920 327 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 GDE1Q9NZC3 331 aa23.03■■□□□ 1.28
SYNGAP1-206ENST00000479510 ASGR2P07307 311 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 MYL9P24844 172 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 HLA-DMAP28067 261 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 PEBP1P30086 187 aaKnown RBP23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 PTGER1P34995 402 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 RCVRNP35243 200 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 RPS21P63220 83 aaKnown RBP23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 MAP4K2Q12851 820 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 ZNF155Q12901 538 aaPredicted RBP23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 RPE65Q16518 533 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 CDC73Q6P1J9 531 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 GDF7Q7Z4P5 450 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 PEX5LQ8IYB4 626 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 SYT14Q8NB59 555 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 SLC41A3Q96GZ6 507 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 ZNF649Q9BS31 505 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 PRR14Q9BWN1 585 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 PRDM9Q9NQV7 894 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 ADAM30Q9UKF2 790 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 ZNF232Q9UNY5 417 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 ZFR2Q9UPR6 939 aaKnown RBP23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 CKAP5Q14008 2032 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 PAK4O96013 591 aaPredicted RBP23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 STATHP02808 62 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 SGCGQ13326 291 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 CLEC12AQ5QGZ9 265 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 CAMKK1Q8N5S9 505 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 Q8N9G6 341 aaPredicted RBP23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 OR2T33Q8NG76 320 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 FGF13Q92913 245 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 ZG16BQ96DA0 208 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 SLC35A4Q96G79 324 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 POLMQ9NP87 494 aaPredicted RBP23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 EQTNQ9NQ60 294 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 ZNF443Q9Y2A4 671 aaPredicted RBP23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 COLEC10Q9Y6Z7 277 aa23.02■■□□□ 1.28
SYNGAP1-206ENST00000479510 ANTXRLA6NF34 631 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 PLA2G10O15496 165 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 FRS3O43559 492 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 TRIM3O75382 744 aaPredicted RBP23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 HOXB3P14651 431 aaPredicted RBP23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 NDUFV2P19404 249 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 GJA4P35212 333 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 AVPR1BP47901 424 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 DAB2P98082 770 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 QPRTQ15274 297 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 EIPR1Q53HC9 387 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 MFSD12Q6NUT3 480 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 SLC30A6Q6NXT4 461 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 MZT2BQ6NZ67 158 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 NUDT18Q6ZVK8 323 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 MTSS1LQ765P7 747 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 LHFPL3Q86UP9 236 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 MEX3DQ86XN8 651 aaKnown RBP23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 GATAD2AQ86YP4 633 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 GID4Q8IVV7 300 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 FAM20CQ8IXL6 584 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 TMEM145Q8NBT3 493 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 SIMC1Q8NDZ2 872 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 ENKURQ8TC29 256 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 DNAJA4Q8WW22 397 aaPredicted RBP23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 MMP28Q9H239 520 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 OR6C2Q9NZP2 312 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 RNGTTO60942 597 aaKnown RBP23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 CHRM5P08912 532 aaPredicted RBP23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 CPN2P22792 545 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 TCEA1P23193 301 aaKnown RBP23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 RAB8AP61006 207 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 RPS15AP62244 130 aaKnown RBP23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 MRPS15P82914 257 aaKnown RBP23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 MLLT1Q03111 559 aaPredicted RBP23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 RUNX3Q13761 415 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms