RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 CXXC1Q9P0U4 656 aaPredicted RBP13.52□□□□□ -0.24
COL20A1-206ENST00000479501 NUFIP1Q9UHK0 495 aaKnown RBP13.52□□□□□ -0.24
COL20A1-206ENST00000479501 GNG8Q9UK08 70 aa13.52□□□□□ -0.24
COL20A1-206ENST00000479501 TRIP12Q14669 1992 aaPredicted RBP13.52□□□□□ -0.24
COL20A1-206ENST00000479501 CASC3O15234 703 aaKnown RBP13.52□□□□□ -0.24
COL20A1-206ENST00000479501 FCER2P06734 321 aa13.52□□□□□ -0.24
COL20A1-206ENST00000479501 VAMP1P23763 118 aa13.52□□□□□ -0.24
COL20A1-206ENST00000479501 S100GP29377 79 aa13.52□□□□□ -0.24
COL20A1-206ENST00000479501 C21orf33P30042 268 aaPredicted RBP13.52□□□□□ -0.24
COL20A1-206ENST00000479501 HNRNPFP52597 415 aaKnown RBP13.52□□□□□ -0.24
COL20A1-206ENST00000479501 DEFB110Q30KQ9 67 aa13.52□□□□□ -0.24
COL20A1-206ENST00000479501 ZNF627Q7L945 461 aa13.52□□□□□ -0.24
COL20A1-206ENST00000479501 B3GNT8Q7Z7M8 397 aa13.52□□□□□ -0.24
COL20A1-206ENST00000479501 ALDH16A1Q8IZ83 802 aa13.52□□□□□ -0.24
COL20A1-206ENST00000479501 CHTF18Q8WVB6 975 aa13.52□□□□□ -0.24
COL20A1-206ENST00000479501 SLCO4A1Q96BD0 722 aa13.52□□□□□ -0.24
COL20A1-206ENST00000479501 TTTY10Q9BZA0 68 aa13.52□□□□□ -0.24
COL20A1-206ENST00000479501 ACTR10Q9NZ32 417 aa13.52□□□□□ -0.24
COL20A1-206ENST00000479501 IL20RAQ9UHF4 553 aa13.52□□□□□ -0.24
COL20A1-206ENST00000479501 B3GNT3Q9Y2A9 372 aa13.52□□□□□ -0.24
COL20A1-206ENST00000479501 TRAPPC13A5PLN9 417 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 ZNF670-ZNF695F2Z2N8 137 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 HOXC11O43248 304 aaPredicted RBP13.52□□□□□ -0.25
COL20A1-206ENST00000479501 CFIP05156 583 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 SLC6A12P48065 614 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 FGFBP1Q14512 234 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 Q6ZSR6 202 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 YIPF7Q8N8F6 280 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 SLC41A3Q96GZ6 507 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 ZNF419Q96HQ0 510 aaPredicted RBP13.52□□□□□ -0.25
COL20A1-206ENST00000479501 PINK1Q9BXM7 581 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 NAA50Q9GZZ1 169 aaKnown RBP13.52□□□□□ -0.25
COL20A1-206ENST00000479501 NANSQ9NR45 359 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 TAS2R3Q9NYW6 316 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 CDH10Q9Y6N8 788 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 SLC19A2O60779 497 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 GP1BBP13224 206 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 CBLP22681 906 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 CA5AP35218 305 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 DAPP51397 102 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 CRYZQ08257 329 aaKnown RBP13.52□□□□□ -0.25
COL20A1-206ENST00000479501 SCGB2B2Q4G0G5 96 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 C6orf132Q5T0Z8 1188 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 LRIF1Q5T3J3 769 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 PLAG1Q6DJT9 500 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 HAGHLQ6PII5 290 aaPredicted RBP13.52□□□□□ -0.25
COL20A1-206ENST00000479501 KIF18BQ86Y91 864 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 CDRT4Q8N9R6 151 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 B3GNT7Q8NFL0 401 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 NEK7Q8TDX7 302 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 NXPE3Q969Y0 559 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 PEX11GQ96HA9 241 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 TREX2Q9BQ50 279 aaPredicted RBP13.52□□□□□ -0.25
COL20A1-206ENST00000479501 EXO5Q9H790 373 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 COQ3Q9NZJ6 369 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 CNIH4Q9P003 139 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 PPT2Q9UMR5 302 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 ATAD5Q96QE3 1844 aa13.52□□□□□ -0.25
COL20A1-206ENST00000479501 FLRT2O43155 660 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 TLX3O43711 291 aaPredicted RBP13.51□□□□□ -0.25
COL20A1-206ENST00000479501 RP2O75695 350 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 CRYZL1O95825 349 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 OR3A3P47888 321 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 OR3A2P47893 321 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 SNTB2Q13425 540 aaKnown RBP13.51□□□□□ -0.25
COL20A1-206ENST00000479501 ELOAQ14241 798 aaKnown RBP13.51□□□□□ -0.25
COL20A1-206ENST00000479501 ADAMTSL4Q6UY14 1074 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 RIT1Q92963 219 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 S100A16Q96FQ6 103 aaKnown RBP13.51□□□□□ -0.25
COL20A1-206ENST00000479501 C19orf43Q9BQ61 176 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 STUB1Q9UNE7 303 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 PRSS38A1L453 326 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 ATXN7L3Q14CW9 347 aaPredicted RBP13.51□□□□□ -0.25
COL20A1-206ENST00000479501 FAM76BQ5HYJ3 339 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 Q6ZPB1 254 aaPredicted RBP13.51□□□□□ -0.25
COL20A1-206ENST00000479501 PLCZ1Q86YW0 608 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 ZFP41Q8N8Y5 198 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 DUS3LQ96G46 650 aaKnown RBP13.51□□□□□ -0.25
COL20A1-206ENST00000479501 B3GNT4Q9C0J1 378 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 SLC39A1Q9NY26 324 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 ADAM29Q9UKF5 820 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 NOP16Q9Y3C1 178 aaKnown RBP13.51□□□□□ -0.25
COL20A1-206ENST00000479501 SLC22A31A6NKX4 558 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 MAN2B1O00754 1011 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 SIPA1L1O43166 1804 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 PPM1BO75688 479 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 AHSA1O95433 338 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 PYCR1P32322 319 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 AHRP35869 848 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 GRK1Q15835 563 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 TBPL2Q6SJ96 375 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 TM9SF2Q99805 663 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 MS4A8Q9BY19 250 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 HDAC8Q9BY41 377 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 TPSD1Q9BZJ3 242 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 ZNF385DQ9H6B1 395 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 THAP10Q9P2Z0 257 aaPredicted RBP13.51□□□□□ -0.25
COL20A1-206ENST00000479501 KIF13BQ9NQT8 1826 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 A0A1B0GVT2 93 aa13.51□□□□□ -0.25
COL20A1-206ENST00000479501 J3KTA2 159 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms