RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 IGKV1D-16P01601 117 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 ELAVL4P26378 380 aaKnown RBP14.23□□□□□ -0.13
HMGA1-206ENST00000478214 PTPN6P29350 595 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 WNT3P56703 355 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 MRPS22P82650 360 aaKnown RBP14.23□□□□□ -0.13
HMGA1-206ENST00000478214 PRR5P85299 388 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 LSM12Q3MHD2 195 aaKnown RBP14.23□□□□□ -0.13
HMGA1-206ENST00000478214 VPS26BQ4G0F5 336 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 GXYLT1Q4G148 440 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 MAMDC2Q7Z304 686 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-206ENST00000478214 MAVSQ7Z434 540 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 CDRT4Q8N9R6 151 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 WDSUB1Q8N9V3 476 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 SLC16A11Q8NCK7 471 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 PSMA8Q8TAA3 256 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 NEIL3Q8TAT5 605 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 ITLN2Q8WWU7 325 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-206ENST00000478214 OTUB1Q96FW1 271 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-206ENST00000478214 RMND5BQ96G75 393 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-206ENST00000478214 DMRTA2Q96SC8 542 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 VKORC1Q9BQB6 163 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 YIPF4Q9BSR8 244 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 SERHLQ9NQF3 203 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 PNPLA3Q9NST1 481 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 FLRT3Q9NZU0 649 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 WIF1Q9Y5W5 379 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 EXPH5Q8NEV8 1989 aa14.23□□□□□ -0.13
HMGA1-206ENST00000478214 C17orf51A8MQB3 221 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 ZNF195O14628 629 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 BCKDKO14874 412 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 CFLARO15519 480 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 KCNH1O95259 989 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 HMGN2P05204 90 aaKnown RBP14.22□□□□□ -0.13
HMGA1-206ENST00000478214 HPNP05981 417 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 CCT3P49368 545 aaKnown RBP14.22□□□□□ -0.13
HMGA1-206ENST00000478214 GAS1P54826 345 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 NME5P56597 212 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 HBA1P69905 142 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 LASP1Q14847 261 aaKnown RBP14.22□□□□□ -0.13
HMGA1-206ENST00000478214 TOMM20Q15388 145 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 DUSP5Q16690 384 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 SPDYE7PQ495Y7 208 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 SLC9B1Q4ZJI4 515 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 EIPR1Q53HC9 387 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 EXOSC6Q5RKV6 272 aaKnown RBP14.22□□□□□ -0.13
HMGA1-206ENST00000478214 NXNQ6DKJ4 435 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 OR5M10Q6IEU7 315 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 SPATA19Q7Z5L4 167 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 MRGPRGQ86SM5 289 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 GALNT10Q86SR1 603 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 CLECL1Q8IZS7 167 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 RPRMLQ8N4K4 120 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 OR8J2Q8NGG1 315 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 PIWIL2Q8TC59 973 aaKnown RBP14.22□□□□□ -0.13
HMGA1-206ENST00000478214 JADE3Q92613 823 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 SARAFQ96BY9 339 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 TEX37Q96LM6 180 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 TP63Q9H3D4 680 aaPredicted RBP14.22□□□□□ -0.13
HMGA1-206ENST00000478214 NEUROD4Q9HD90 331 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 AIG1Q9NVV5 245 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 MRTO4Q9UKD2 239 aaKnown RBP14.22□□□□□ -0.13
HMGA1-206ENST00000478214 ACAD8Q9UKU7 415 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 PCNX1Q96RV3 2341 aa14.22□□□□□ -0.13
HMGA1-206ENST00000478214 SCO2O43819 266 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 FADS1O60427 444 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 UTS2O95399 124 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 ALOX5P09917 674 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 COL8A1P27658 744 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 EVI2BP34910 448 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 SOAT1P35610 550 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 KIR3DL1P43629 444 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 PRIM2P49643 509 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 PSMD4P55036 377 aaKnown RBP14.21□□□□□ -0.13
HMGA1-206ENST00000478214 UFM1P61960 85 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 PPP2R2AP63151 447 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 PHC1P78364 1004 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 TP53BP2Q13625 1128 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 SPANXN4Q5MJ08 99 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 ZNF585AQ6P3V2 769 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 ZCCHC12Q6PEW1 402 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 RPTNQ6XPR3 784 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 YRDCQ86U90 279 aaKnown RBP14.21□□□□□ -0.13
HMGA1-206ENST00000478214 ANKRD46Q86W74 232 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 PLCZ1Q86YW0 608 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 EID3Q8N140 333 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 MARVELD2Q8N4S9 558 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 OR56A1Q8NGH5 318 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 OR5AK3PQ8NH89 298 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 LRRC8CQ8TDW0 803 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 PHF10Q8WUB8 498 aaKnown RBP14.21□□□□□ -0.13
HMGA1-206ENST00000478214 DYDC1Q8WWB3 177 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 TESCQ96BS2 214 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 MAELQ96JY0 434 aaKnown RBP14.21□□□□□ -0.13
HMGA1-206ENST00000478214 SLCO1B3Q9NPD5 702 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 FBXL2Q9UKC9 423 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 SLC6A5Q9Y345 797 aa14.21□□□□□ -0.13
HMGA1-206ENST00000478214 NCKAP5O14513 1909 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 C15orf38-AP3S2A0A0A6YYH1 394 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 B4DXG7 233 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 C9JVG2 144 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 303.1 ms