RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 TMEM251Q8N6I4 163 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 COX18Q8N8Q8 333 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 GLB1L3Q8NCI6 653 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-222ENST00000478095 ST6GALNAC3Q8NDV1 305 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 OR52N2Q8NGI0 321 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 OR5D16Q8NGK9 328 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 SFXN5Q8TD22 340 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 CDS1Q92903 461 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 VPS33AQ96AX1 596 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 ZNF597Q96LX8 424 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 GPR137Q96N19 417 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 CCDC115Q96NT0 180 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 PANX1Q96RD7 426 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 SECISBP2Q96T21 854 aaKnown RBP9.41□□□□□ -0.9
HDAC6-222ENST00000478095 OSBPL11Q9BXB4 747 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 TMEM120AQ9BXJ8 343 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 DEFB127Q9H1M4 99 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 SERHL2Q9H4I8 314 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 GPATCH2Q9NW75 528 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 FAM120CQ9NX05 1096 aaKnown RBP9.41□□□□□ -0.9
HDAC6-222ENST00000478095 BOKQ9UMX3 212 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-222ENST00000478095 FAF1Q9UNN5 650 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-222ENST00000478095 HRH3Q9Y5N1 445 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 FAM234BA2RU67 622 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 NR5A2O00482 541 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 GNB5O14775 395 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 ASNA1O43681 348 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 SCO2O43819 266 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 GLSO94925 669 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-222ENST00000478095 KCNH1O95259 989 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 IL6P05231 212 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 RFPL3SP0C7P2 107 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 TROVE2P10155 538 aaKnown RBP eCLIP9.4□□□□□ -0.9
HDAC6-222ENST00000478095 CD1EP15812 388 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 MAP3K8P41279 467 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 MASP1P48740 699 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 GYS2P54840 703 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 PSPHP78330 225 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 STX5Q13190 355 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 EFR3AQ14156 821 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 TBCELQ5QJ74 424 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 CDC73Q6P1J9 531 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 ANGPTL8Q6UXH0 198 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 C6orf120Q7Z4R8 191 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 ZAR1Q86SH2 424 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 SLC22A16Q86VW1 577 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 ADAMTS15Q8TE58 950 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 HOXB13Q92826 284 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-222ENST00000478095 MOAP1Q96BY2 351 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 TMCO6Q96DC7 493 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 SLC35G5Q96KT7 338 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 OR7D2Q96RA2 312 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 SLC35A5Q9BS91 424 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 ANGPTL4Q9BY76 406 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 ACTRT3Q9BYD9 372 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 CCDC134Q9H6E4 229 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 ZNF703Q9H7S9 590 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-222ENST00000478095 IL1RL2Q9HB29 575 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 ZFP64Q9NPA5 681 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 FBXO34Q9NWN3 711 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 GIN1Q9NXP7 522 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 CCDC167Q9P0B6 97 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 BTNL2Q9UIR0 455 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 SH3BGRL2Q9UJC5 107 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 OSGIN2Q9Y236 505 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 LIPGQ9Y5X9 500 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 KCNE3Q9Y6H6 103 aa9.4□□□□□ -0.9
HDAC6-222ENST00000478095 ANKRD33BA6NCL7 494 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 CCDC154A6NI56 674 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 TTC36A6NLP5 189 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 RFXANKO14593 260 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 TRIM3O75382 744 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-222ENST00000478095 KCNK2O95069 426 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 SNX4O95219 450 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 UTS2O95399 124 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 IL33O95760 270 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 MATN1P21941 496 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 UQCRC2P22695 453 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 GDF1P27539 372 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 EVI2BP34910 448 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 CHI3L1P36222 383 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-222ENST00000478095 MAN2A2P49641 1150 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 RNF144AP50876 292 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-222ENST00000478095 PNLIPRP2P54317 469 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 PSMD4P55036 377 aaKnown RBP9.39□□□□□ -0.91
HDAC6-222ENST00000478095 POU6F2P78424 691 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-222ENST00000478095 SQLEQ14534 574 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 GTDC1Q4AE62 458 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 AGKQ53H12 422 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 EXOSC6Q5RKV6 272 aaKnown RBP9.39□□□□□ -0.91
HDAC6-222ENST00000478095 C6orf10Q5SRN2 563 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 FNDC7Q5VTL7 733 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 OR5M10Q6IEU7 315 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 TNFAIP8L2Q6P589 184 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-222ENST00000478095 ZCCHC12Q6PEW1 402 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 BHLHB9Q6PI77 547 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 SLC2A7Q6PXP3 512 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 ZNF621Q6ZSS3 439 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 FUNDC1Q8IVP5 155 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 GHDCQ8N2G8 530 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms