RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 SLMAPQ14BN4 828 aa13.59□□□□□ -0.23
SMG5-204ENST00000476954 PRICKLE4Q2TBC4 344 aa13.59□□□□□ -0.23
SMG5-204ENST00000476954 TRMT12Q53H54 448 aaKnown RBP13.59□□□□□ -0.23
SMG5-204ENST00000476954 C6orf163Q5TEZ5 329 aa13.59□□□□□ -0.23
SMG5-204ENST00000476954 CYP20A1Q6UW02 462 aa13.59□□□□□ -0.23
SMG5-204ENST00000476954 NUFIP2Q7Z417 695 aaKnown RBP13.59□□□□□ -0.23
SMG5-204ENST00000476954 OR4K14Q8NGD5 310 aa13.59□□□□□ -0.23
SMG5-204ENST00000476954 OR52R1Q8NGF1 315 aa13.59□□□□□ -0.23
SMG5-204ENST00000476954 OR10D3Q8NH80 312 aa13.59□□□□□ -0.23
SMG5-204ENST00000476954 ZFAND2BQ8WV99 257 aa13.59□□□□□ -0.23
SMG5-204ENST00000476954 DTNBP1Q96EV8 351 aa13.59□□□□□ -0.23
SMG5-204ENST00000476954 HDHD5Q9BXW7 423 aa13.59□□□□□ -0.23
SMG5-204ENST00000476954 POTEKPQ9BYX7 375 aa13.59□□□□□ -0.23
SMG5-204ENST00000476954 BHLHE41Q9C0J9 482 aaPredicted RBP13.59□□□□□ -0.23
SMG5-204ENST00000476954 ZNF639Q9UID6 485 aa13.59□□□□□ -0.23
SMG5-204ENST00000476954 TMEFF2Q9UIK5 374 aaPredicted RBP13.59□□□□□ -0.23
SMG5-204ENST00000476954 FAM157AC9JC47 383 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 CXCL13O43927 109 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 IPO7O95373 1038 aaKnown RBP13.58□□□□□ -0.24
SMG5-204ENST00000476954 ADAP00813 363 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 TUBBP07437 444 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 CSF3P09919 207 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 EMDP50402 254 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 CORO7P57737 925 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 LTB4RQ15722 352 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 PDCD2Q16342 344 aaPredicted RBP13.58□□□□□ -0.24
SMG5-204ENST00000476954 LGSNQ5TDP6 509 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 TFAP2EQ6VUC0 442 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 GALNT10Q86SR1 603 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 IGDCC3Q8IVU1 814 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 MUC15Q8N387 334 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 CEP112Q8N8E3 955 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 GBP7Q8N8V2 638 aaPredicted RBP13.58□□□□□ -0.24
SMG5-204ENST00000476954 OR52B6Q8NGF0 335 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 KISS1RQ969F8 398 aaPredicted RBP13.58□□□□□ -0.24
SMG5-204ENST00000476954 UBE2E3Q969T4 207 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 EFHD2Q96C19 240 aaPredicted RBP13.58□□□□□ -0.24
SMG5-204ENST00000476954 CERS2Q96G23 380 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 FOXN4Q96NZ1 517 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 DHRS9Q9BPW9 319 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 DDX31Q9H8H2 851 aaKnown RBP13.58□□□□□ -0.24
SMG5-204ENST00000476954 CNOT10Q9H9A5 744 aaKnown RBP13.58□□□□□ -0.24
SMG5-204ENST00000476954 ANKRA2Q9H9E1 313 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 FLRT3Q9NZU0 649 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 METRNQ9UJH8 293 aa13.58□□□□□ -0.24
SMG5-204ENST00000476954 GPR55Q9Y2T6 319 aaPredicted RBP13.58□□□□□ -0.24
SMG5-204ENST00000476954 HEATR1Q9H583 2144 aaKnown RBP13.58□□□□□ -0.24
SMG5-204ENST00000476954 LRP5LA4QPB2 252 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 GMFGO60234 142 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 PORP16435 677 aaPredicted RBP13.57□□□□□ -0.24
SMG5-204ENST00000476954 FEN1P39748 380 aaKnown RBP13.57□□□□□ -0.24
SMG5-204ENST00000476954 MAP4K2Q12851 820 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 STK11Q15831 433 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 CARTPTQ16568 116 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 TRMT10BQ6PF06 316 aaKnown RBP13.57□□□□□ -0.24
SMG5-204ENST00000476954 RINLQ6ZS11 566 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 LARP4Q71RC2 724 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMG5-204ENST00000476954 BHLHA15Q7RTS1 189 aaPredicted RBP13.57□□□□□ -0.24
SMG5-204ENST00000476954 GALNT7Q86SF2 657 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 FBXL14Q8N1E6 418 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 PIAS4Q8N2W9 510 aaPredicted RBP13.57□□□□□ -0.24
SMG5-204ENST00000476954 TCAIMQ8N3R3 496 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 ADGRG7Q96K78 797 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 NPAS1Q99742 590 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 ZNF696Q9H7X3 374 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 PPANQ9NQ55 473 aaKnown RBP13.57□□□□□ -0.24
SMG5-204ENST00000476954 CFL2Q9Y281 166 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 PCDHGB1Q9Y5G3 927 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 PSAT1Q9Y617 370 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 AP4B1Q9Y6B7 739 aa13.57□□□□□ -0.24
SMG5-204ENST00000476954 FGGP02679 453 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 CT45A8P0DMV1 189 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 CT45A9P0DMV2 189 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 IL2RGP31785 369 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 PDLIM4P50479 330 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 FABP6P51161 128 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 MRPS35P82673 323 aaKnown RBP13.56□□□□□ -0.24
SMG5-204ENST00000476954 EFR3AQ14156 821 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 PPA1Q15181 289 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 OR4D1Q15615 310 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 MSS51Q4VC12 460 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 CT45A2Q5DJT8 189 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 FAM180BQ6P0A1 224 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 TTC27Q6P3X3 843 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 NPSR1Q6W5P4 371 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 Q6ZSR9 355 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 OR4N2Q8NGD1 307 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 OR2W6PQ8NHA6 318 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 EXT2Q93063 718 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 C1GALT1C1Q96EU7 318 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 PIMREGQ9BSJ6 248 aa13.56□□□□□ -0.24
SMG5-204ENST00000476954 DDX47Q9H0S4 455 aaKnown RBP13.56□□□□□ -0.24
SMG5-204ENST00000476954 METTL17Q9H7H0 456 aaPredicted RBP13.56□□□□□ -0.24
SMG5-204ENST00000476954 MCTS1Q9ULC4 181 aaKnown RBP13.56□□□□□ -0.24
SMG5-204ENST00000476954 CORO1CQ9ULV4 474 aaPredicted RBP13.56□□□□□ -0.24
SMG5-204ENST00000476954 A0A0A6YYJ9 748 aa13.55□□□□□ -0.24
SMG5-204ENST00000476954 FAM95CA0A1B0GW59 222 aa13.55□□□□□ -0.24
SMG5-204ENST00000476954 SLCO1B7G3V0H7 640 aa13.55□□□□□ -0.24
SMG5-204ENST00000476954 LINC01387J3KSC0 135 aa13.55□□□□□ -0.24
SMG5-204ENST00000476954 SMAD9O15198 467 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms