RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SERINC2Q96SA4 455 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 CCDC32Q9BV29 185 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 TEX12Q9BXU0 123 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 SAP130Q9H0E3 1048 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 MTHFD2LQ9H903 347 aaPredicted RBP15.39■□□□□ 0.05
TMEM53-208ENST00000476724 SYNPO2LQ9H987 977 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 CACYBPQ9HB71 228 aaKnown RBP15.39■□□□□ 0.05
TMEM53-208ENST00000476724 ISYNA1Q9NPH2 558 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 ZNF624Q9P2J8 865 aaPredicted RBP15.39■□□□□ 0.05
TMEM53-208ENST00000476724 PCDHGB6Q9Y5F9 930 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 SLCO1B1Q9Y6L6 691 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 A0A1W2PS29 197 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 HYKKA2RU49 373 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 FAM170BA6NMN3 283 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 BTN3A3O00478 584 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 TNFSF14O43557 240 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 ZNF888P0CJ79 500 aaPredicted RBP15.39■□□□□ 0.05
TMEM53-208ENST00000476724 SMIM10L1P0DMW3 83 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 CPN2P22792 545 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 TLX1P31314 330 aaPredicted RBP15.39■□□□□ 0.05
TMEM53-208ENST00000476724 SOX3P41225 446 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 DECR1Q16698 335 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 TMEM44Q2T9K0 475 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 FBXO42Q6P3S6 717 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 ZNF730Q6ZMV8 503 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 PRICKLE2Q7Z3G6 844 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 BCDIN3DQ7Z5W3 292 aaKnown RBP15.39■□□□□ 0.05
TMEM53-208ENST00000476724 VRK2Q86Y07 508 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 KIF18BQ86Y91 864 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 PHC2Q8IXK0 858 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 TSTD1Q8NFU3 115 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 OR13H1Q8NG92 308 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 OR4K14Q8NGD5 310 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 OR52P1PQ8NH57 321 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 PIGXQ8TBF5 258 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 SLC35A4Q96G79 324 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 SMIM10Q96HG1 83 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 GPR174Q9BXC1 333 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 TWSG1Q9GZX9 223 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 QRSL1Q9H0R6 528 aaKnown RBP15.39■□□□□ 0.05
TMEM53-208ENST00000476724 TMEM168Q9H0V1 697 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 EQTNQ9NQ60 294 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 QPCTLQ9NXS2 382 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 WSB2Q9NYS7 404 aaPredicted RBP15.39■□□□□ 0.05
TMEM53-208ENST00000476724 ZNF232Q9UNY5 417 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 TNFRSF10CO14798 259 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 CPEP16870 476 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 ZNF10P21506 573 aaPredicted RBP15.38■□□□□ 0.05
TMEM53-208ENST00000476724 AKT2P31751 481 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 STAT5AP42229 794 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 BNC1Q01954 994 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 CBX3Q13185 183 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 DOC2BQ14184 412 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 KIAA0895LQ68EN5 471 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 MFSD12Q6NUT3 480 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 Q6ZSR6 202 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 HMGN2P46Q86SG4 172 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 SLC22A18ASQ8N1D0 253 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 DEFB123Q8N688 67 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 JPH3Q8WXH2 748 aaPredicted RBP15.38■□□□□ 0.05
TMEM53-208ENST00000476724 ACOT11Q8WXI4 607 aaPredicted RBP15.38■□□□□ 0.05
TMEM53-208ENST00000476724 KAT2AQ92830 837 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 SLC30A2Q9BRI3 323 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 POLE4Q9NR33 117 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 CTPS2Q9NRF8 586 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 ANKMY1Q9P2S6 941 aa15.38■□□□□ 0.05
TMEM53-208ENST00000476724 GOLGA4Q13439 2230 aaKnown RBP15.38■□□□□ 0.05
TMEM53-208ENST00000476724 TMEM129A0AVI4 362 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 STK25O00506 426 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 UBXN7O94888 489 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 ALOX12P18054 663 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 RPS19P39019 145 aaKnown RBP15.37■□□□□ 0.05
TMEM53-208ENST00000476724 OMPP47874 163 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 SLC13A2Q13183 592 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 MINDY4Q4G0A6 757 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 OSTF1Q92882 214 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 SEMA4GQ9NTN9 838 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 KCMF1Q9P0J7 381 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 PTGFRNQ9P2B2 879 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 TRAPPC4Q9Y296 219 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 CPSF4LA6NMK7 179 aaKnown RBP15.37■□□□□ 0.05
TMEM53-208ENST00000476724 ZSCAN9O15535 394 aaPredicted RBP15.37■□□□□ 0.05
TMEM53-208ENST00000476724 OR5F1O95221 314 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 RASGRP1O95267 797 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 FPR3P25089 353 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 WNT4P56705 351 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 RGS8P57771 180 aaPredicted RBP15.37■□□□□ 0.05
TMEM53-208ENST00000476724 LSM11P83369 360 aaKnown RBP eCLIP15.37■□□□□ 0.05
TMEM53-208ENST00000476724 RUNX1T1Q06455 604 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 LARS2Q15031 903 aaKnown RBP15.37■□□□□ 0.05
TMEM53-208ENST00000476724 ALG11Q2TAA5 492 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 ARHGAP11BQ3KRB8 267 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 USP53Q70EK8 1073 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 PEX5LQ8IYB4 626 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 OR2L13Q8N349 312 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 ZG16BQ96DA0 208 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 OR2A5Q96R48 311 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 KCNS3Q9BQ31 491 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 PLA2G12AQ9BZM1 189 aa15.37■□□□□ 0.05
TMEM53-208ENST00000476724 EGLN3Q9H6Z9 239 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms