RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 NUDT13Q86X67 352 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 GALNT13Q8IUC8 556 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 NKAIN4Q8IVV8 208 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 MEIOBQ8N635 442 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 YIPF7Q8N8F6 280 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 MAFAQ8NHW3 353 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ASB12Q8WXK4 309 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 SMPDL3BQ92485 455 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF707Q96C28 371 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 PLA2G12AQ9BZM1 189 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 IL21Q9HBE4 155 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 CLEC1BQ9P126 229 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF69Q9UC07 566 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 POLR1DQ9Y2S0 133 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 LRRC37A2A6NM11 1700 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ISPDA4D126 451 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 M0R082 166 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 KMOO15229 486 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 SLC16A5O15375 505 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 JRKO75564 520 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 SIX6O95475 246 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ALPPP05187 535 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CDK1P06493 297 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CTSEP14091 401 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 SNRPBP14678 240 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CR2P20023 1033 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 SHC1P29353 583 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 HOXA9P31269 272 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 EVI2BP34910 448 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 MAGEA11P43364 429 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 MAPK8P45983 427 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 DHCR24Q15392 516 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 MZT2BQ6NZ67 158 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 BORAQ6PGQ7 559 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 OXR1Q8N573 874 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 OR5T3Q8NGG3 340 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF563Q8TA94 476 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 PIGXQ8TBF5 258 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ECHDC3Q96DC8 303 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 FUZQ9BT04 418 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 PDCD10Q9BUL8 212 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CDADC1Q9BWV3 514 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 P2RY12Q9H244 342 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 MMP27Q9H306 513 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 SRMSQ9H3Y6 488 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 TMEM185BQ9H7F4 350 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 GORASP2Q9H8Y8 452 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 FBXL4Q9UKA2 621 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 TBC1D24Q9ULP9 559 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 SLC7A7Q9UM01 511 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 RPL36Q9Y3U8 105 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ARID2Q68CP9 1835 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 C2orf72A6NCS6 295 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 SNTNA6NMZ2 147 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 PRRT4C9JH25 899 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 PI15O43692 258 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 LCMT2O60294 686 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CSO75390 466 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 PPP1R3DO95685 299 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 PLATP00750 562 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 GABRA3P34903 492 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 HTR7P34969 479 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 GGT2P36268 569 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ETV5P41161 510 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CAPZA2P47755 286 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 RPL34P49207 117 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ETV1P50549 477 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 LIM2P55344 173 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 AP1S2P56377 157 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 SHC2P98077 582 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 MAT1AQ00266 395 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 RHAGQ02094 409 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 TAP2Q03519 686 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 RAB33AQ14088 237 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 OXA1LQ15070 435 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 SPIN4Q56A73 249 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF362Q5T0B9 420 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ZDHHC20Q5W0Z9 365 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CBLL1Q75N03 491 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 PTRH1Q86Y79 214 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 KLHDC8AQ8IYD2 350 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 KDM8Q8N371 416 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CHST4Q8NCG5 386 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 OR2I1PQ8NGU4 316 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CEP76Q8TAP6 659 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 THEM6Q8WUY1 208 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 TMEM255BQ8WV15 326 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 SMPDL3AQ92484 453 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 LMF1Q96S06 567 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 MNTQ99583 582 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ELF4Q99607 663 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 SLC22A4Q9H015 551 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 RDH14Q9HBH5 336 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 FAM86C1Q9NVL1 165 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 OR6C2Q9NZP2 312 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 P2RX2Q9UBL9 471 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 GMEB1Q9Y692 573 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 HEATR1Q9H583 2144 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ARHGEF17Q96PE2 2063 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 VWA8A3KMH1 1905 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms