RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ZSWIM9Q86XI8 627 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 OR10Q1Q8NGQ4 319 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 OR5AK3PQ8NH89 298 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 PYURFQ96I23 114 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 SULT4A1Q9BR01 284 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 SLC29A3Q9BZD2 475 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 DNTTIP1Q9H147 329 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 FAM124BQ9H5Z6 455 aaPredicted RBP10.94□□□□□ -0.66
U2AF1-209ENST00000475639 ABCB8Q9NUT2 735 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 PPP4R1LQ9P1A2 415 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 REV1Q9UBZ9 1251 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 NDRG2Q9UN36 371 aaKnown RBP10.94□□□□□ -0.66
U2AF1-209ENST00000475639 MPPED1O15442 326 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 NPPAP01160 153 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 HTD2P86397 168 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 ASAH1Q13510 395 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 DUOXA1Q1HG43 343 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 ELP2Q6IA86 826 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 NOXRED1Q6NXP6 359 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 TMPRSS12Q86WS5 348 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 GPC2Q8N158 579 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 SLC35F5Q8WV83 523 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 C3orf49Q96BT1 292 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 SAMD10Q9BYL1 202 aa10.94□□□□□ -0.66
U2AF1-209ENST00000475639 SMIM30A4D0T7 59 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 CPED1A4D0V7 1026 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 OR5K4A6NMS3 321 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 A8MVJ9 347 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 B4GALT5O43286 388 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 DFNA5O60443 496 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 CREG1O75629 220 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 SOX14O95416 240 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 SYNGR4O95473 234 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF8P17098 575 aaPredicted RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 HMGCLP35914 325 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 SLC19A1P41440 591 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 SP3Q02447 781 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 MAP2K5Q13163 448 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 GINS1Q14691 196 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 PCBP2Q15366 365 aaKnown RBP eCLIP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 PAQR3Q6TCH7 311 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 TMEM205Q6UW68 189 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 ABHD15Q6UXT9 468 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 TSPYL5Q86VY4 417 aaPredicted RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 LURAP1LQ8IV03 231 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 Q8N402 240 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 LILRB2Q8N423 598 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 ZBTB44Q8NCP5 570 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF675Q8TD23 568 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 GCDHQ92947 438 aaPredicted RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 TGM7Q96PF1 710 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 WDR77Q9BQA1 342 aaPredicted RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 EEF1E1-BLOC1S5C9J1V9 151 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 EEF1E1O43324 174 aaKnown RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 WDPCPO95876 746 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 FASLGP48023 281 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 TATDN3Q17R31 274 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 RAB41Q5JT25 222 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 ARHGAP40Q5TG30 622 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 GALNT10Q86SR1 603 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 LAX1Q8IWV1 398 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 SKA3Q8IX90 412 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 ANKRD53Q8N9V6 530 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 C3orf58Q8NDZ4 430 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 C12orf42Q96LP6 360 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 VRK1Q99986 396 aaPredicted RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 GLIS2Q9BZE0 524 aaPredicted RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 PLEKHM1Q9Y4G2 1056 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 FNDC1Q4ZHG4 1894 aaPredicted RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 KHNYNO15037 678 aaKnown RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 SCAMP1O15126 338 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 DDNO94850 711 aaPredicted RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 KLK1P06870 262 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 ARRB1P49407 418 aaPredicted RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 DGKQP52824 942 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 PITX1P78337 314 aaPredicted RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 CARD16Q5EG05 197 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 KDM4DQ6B0I6 523 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 SMYD5Q6GMV2 418 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 SLC27A4Q6P1M0 643 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 ZFAND4Q86XD8 727 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 RASGRP3Q8IV61 690 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 C9orf62Q8N4C0 152 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 TRMT10AQ8TBZ6 339 aaKnown RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 PSMG2Q969U7 264 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 DCLRE1CQ96SD1 692 aaKnown RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 IKZF5Q9H5V7 419 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 APMAPQ9HDC9 416 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 FAM86C1Q9NVL1 165 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 PPP1R14DQ9NXH3 145 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 ZDHHC3Q9NYG2 299 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 ELF5Q9UKW6 265 aaPredicted RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 LTBP1Q14766 1721 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 PYCR1P32322 319 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 MRPL19P49406 292 aaKnown RBP10.93□□□□□ -0.66
U2AF1-209ENST00000475639 ACTBP60709 375 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 ACTG1P63261 375 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 RSU1Q15404 277 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 REEP3Q6NUK4 255 aa10.93□□□□□ -0.66
U2AF1-209ENST00000475639 KDELC1Q6UW63 502 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms