RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 MAPKAPK3Q16644 382 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 RNFT1Q5M7Z0 435 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 IRAK1BP1Q5VVH5 260 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 BICRALQ6AI39 1079 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 IL20RBQ6UXL0 311 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 ZNF621Q6ZSS3 439 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 SNX32Q86XE0 403 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 SLC44A2Q8IWA5 706 aaPredicted RBP6.42□□□□□ -1.38
LIMD1-204ENST00000474665 SLC15A4Q8N697 577 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 HORMAD2Q8N7B1 307 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 POU5F2Q8N7G0 328 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 BCORP1Q8N888 145 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 ANKS4BQ8N8V4 417 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 OR56A1Q8NGH5 318 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 OR5D16Q8NGK9 328 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 FAM110BQ8TC76 370 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 ZFP90Q8TF47 636 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 TSPEARQ8WU66 669 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 HGDQ93099 445 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 TMBIM1Q969X1 311 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 SPACA9Q96E40 222 aaPredicted RBP6.42□□□□□ -1.38
LIMD1-204ENST00000474665 SCMH1Q96GD3 660 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 PANX1Q96RD7 426 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 TAAR6Q96RI8 345 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 SLC35A5Q9BS91 424 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 RSPO3Q9BXY4 272 aaPredicted RBP6.42□□□□□ -1.38
LIMD1-204ENST00000474665 RTN4RQ9BZR6 473 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 TRIM8Q9BZR9 551 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.42□□□□□ -1.38
LIMD1-204ENST00000474665 LUZP4Q9P127 313 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 LRFN1Q9P244 771 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 TEKT2Q9UIF3 430 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 CFL2Q9Y281 166 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 NTNG1Q9Y2I2 539 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 ARL2BPQ9Y2Y0 163 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 NPFFR2Q9Y5X5 522 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 GMEB1Q9Y692 573 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 CAPN7Q9Y6W3 813 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 LOC100653049A0A140TA62 436 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 G3V3Y1 287 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 HMGN4O00479 90 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 SLC22A2O15244 555 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 ACOX3O15254 700 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 NME2P1O60361 137 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 COQ9O75208 318 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 PPM1BO75688 479 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 SLC25A12O75746 678 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 KRT34O76011 436 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 KCNK2O95069 426 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 SNRPB2P08579 225 aaKnown RBP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 NUDT7P0C024 238 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 DDX5P17844 614 aaKnown RBP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 NME2P22392 152 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 ADSLP30566 484 aaPredicted RBP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 SOAT1P35610 550 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 PIGAP37287 484 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 GAS1P54826 345 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 KCNK10P57789 538 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 DCAF7P61962 342 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 ARG2P78540 354 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 MRPS22P82650 360 aaKnown RBP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 PRR5P85299 388 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 FOXO1Q12778 655 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 INPP5JQ15735 1006 aaPredicted RBP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 ADRM1Q16186 407 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 SPDYE7PQ495Y7 208 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 CYP27C1Q4G0S4 372 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 PRR30Q53SZ7 412 aaPredicted RBP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 C6orf10Q5SRN2 563 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 CCNJQ5T5M9 372 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 C6orf163Q5TEZ5 329 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 FNDC7Q5VTL7 733 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 HLA-DQA1Q5Y7H0 255 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 AP1ARQ63HQ0 302 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 HEPHL1Q6MZM0 1159 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 CDC73Q6P1J9 531 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 TNFAIP8L2Q6P589 184 aaPredicted RBP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 ZCCHC12Q6PEW1 402 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 APOOLQ6UXV4 268 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 SZRD1Q7Z422 152 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 GALNT10Q86SR1 603 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 RNF130Q86XS8 419 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 CYP4Z2PQ8N1L4 340 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 ZADH2Q8N4Q0 377 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 TMEM156Q8N614 296 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 FITM2Q8N6M3 262 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 CDRT4Q8N9R6 151 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 VPS37AQ8NEZ2 397 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 OR5M3Q8NGP4 307 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 FBXO27Q8NI29 283 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 PNPT1Q8TCS8 783 aaKnown RBP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 GPR151Q8TDV0 419 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 PAQR8Q8TEZ7 354 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 ASB15Q8WXK1 588 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 SLC9A6Q92581 669 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 CDS1Q92903 461 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 RAB8BQ92930 207 aa6.41□□□□□ -1.38
LIMD1-204ENST00000474665 EFHD2Q96C19 240 aaPredicted RBP6.41□□□□□ -1.38
LIMD1-204ENST00000474665 ZG16BQ96DA0 208 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms