RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 C16orf52Q8NHV5 167 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 NUBPLQ8TB37 319 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 CHMP6Q96FZ7 201 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 ZBTB18Q99592 522 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 ITPAQ9BY32 194 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 TRIM45Q9H8W5 580 aaPredicted RBP8.41□□□□□ -1.06
SMC4-213ENST00000472282 SDR39U1Q9NRG7 319 aaPredicted RBP8.41□□□□□ -1.06
SMC4-213ENST00000472282 SIRT3Q9NTG7 399 aaPredicted RBP8.41□□□□□ -1.06
SMC4-213ENST00000472282 DDX18Q9NVP1 670 aaKnown RBP8.41□□□□□ -1.06
SMC4-213ENST00000472282 FAM53CQ9NYF3 392 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 ZIM2Q9NZV7 527 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 MYOTQ9UBF9 498 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 ZNF835Q9Y2P0 537 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 PCNX3Q9H6A9 2034 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 A0A087WV62 115 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 C2orf92A0A1B0GVN3 265 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 PINLYPA6NC86 204 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 C19orf84I3L1E1 186 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 UPK1AO00322 258 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 PLOD2O00469 737 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 CFLARO15519 480 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 ASNA1O43681 348 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 ZNF354AO60765 605 aaPredicted RBP8.4□□□□□ -1.06
SMC4-213ENST00000472282 COQ9O75208 318 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 SLC22A3O75751 556 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 BCAS2O75934 225 aaPredicted RBP8.4□□□□□ -1.06
SMC4-213ENST00000472282 OR2J2O76002 312 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 PGRP06401 933 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 NCF2P19878 526 aaPredicted RBP8.4□□□□□ -1.06
SMC4-213ENST00000472282 S100A3P33764 101 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 TRHRP34981 398 aaPredicted RBP8.4□□□□□ -1.06
SMC4-213ENST00000472282 SOAT1P35610 550 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 SOX3P41225 446 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 ZFP36L2P47974 494 aaKnown RBP8.4□□□□□ -1.06
SMC4-213ENST00000472282 MRPL19P49406 292 aaKnown RBP8.4□□□□□ -1.06
SMC4-213ENST00000472282 CYB561P49447 251 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 MEOX1P50221 254 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 EMDP50402 254 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 HLCSP50747 726 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 SSR4P51571 173 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 GPR85P60893 370 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 SQLEQ14534 574 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 MLC1Q15049 377 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 NNATQ16517 81 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 HLA-DQA1Q5Y7H0 255 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 Q6ZPB1 254 aaPredicted RBP8.4□□□□□ -1.06
SMC4-213ENST00000472282 SPPL2CQ8IUH8 684 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 SULF2Q8IWU5 870 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 OR2L13Q8N349 312 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 ZNF441Q8N8Z8 693 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 GLB1L3Q8NCI6 653 aaPredicted RBP8.4□□□□□ -1.06
SMC4-213ENST00000472282 C10orf82Q8WW14 230 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 ASB15Q8WXK1 588 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 OR5P2Q8WZ92 322 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 ERP27Q96DN0 273 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 ELP4Q96EB1 424 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 RASL10BQ96S79 203 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 FAM107BQ9H098 131 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 NXF5Q9H1B4 397 aaKnown RBP8.4□□□□□ -1.06
SMC4-213ENST00000472282 CXorf36Q9H7Y0 433 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 FOLH1BQ9HBA9 442 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 EQTNQ9NQ60 294 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 DEPPQ9NTK1 212 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 FAM120CQ9NX05 1096 aaKnown RBP8.4□□□□□ -1.06
SMC4-213ENST00000472282 KLHL14Q9P2G3 628 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 PRODH2Q9UF12 536 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 C19orf53Q9UNZ5 99 aaPredicted RBP8.4□□□□□ -1.06
SMC4-213ENST00000472282 CFL2Q9Y281 166 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 YARS2Q9Y2Z4 477 aaKnown RBP8.4□□□□□ -1.06
SMC4-213ENST00000472282 SNX8Q9Y5X2 465 aa8.4□□□□□ -1.06
SMC4-213ENST00000472282 DNAJC13O75165 2243 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 A0A0G2JMM0 328 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 A0A1W2PPB8 328 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 A0A1W2PRS3 328 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 FAM234BA2RU67 622 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 KIR3DP1A8MWS1 328 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 NR5A2O00482 541 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 RNASET2O00584 256 aaKnown RBP8.39□□□□□ -1.07
SMC4-213ENST00000472282 ADAM10O14672 748 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 GSC2O15499 205 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 EMC8O43402 210 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 SCN2BO60939 215 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 ERN1O75460 977 aaKnown RBP8.39□□□□□ -1.07
SMC4-213ENST00000472282 OR6B1O95007 311 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 PSMG1O95456 288 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 NADKO95544 446 aaPredicted RBP8.39□□□□□ -1.07
SMC4-213ENST00000472282 CPSF4O95639 269 aaKnown RBP8.39□□□□□ -1.07
SMC4-213ENST00000472282 SNRPB2P08579 225 aaKnown RBP8.39□□□□□ -1.07
SMC4-213ENST00000472282 IFI6P09912 130 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 FSTP19883 344 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 ATP4BP51164 291 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 POLR2JP52435 117 aaKnown RBP8.39□□□□□ -1.07
SMC4-213ENST00000472282 PRKAG1P54619 331 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 HBA1P69905 142 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 TIGD2Q4W5G0 525 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 ANXA8L1Q5VT79 327 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 NPSR1Q6W5P4 371 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 C3P1Q6ZMU1 363 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 WDR53Q7Z5U6 358 aaPredicted RBP8.39□□□□□ -1.07
SMC4-213ENST00000472282 FUNDC1Q8IVP5 155 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms