RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 TRIM45Q9H8W5 580 aaPredicted RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 CXorf21Q9HAI6 301 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 CACYBPQ9HB71 228 aaKnown RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 A4GALTQ9NPC4 353 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 ADAP2Q9NPF8 381 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 LANCL2Q9NS86 450 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 SIRT3Q9NTG7 399 aaPredicted RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 EXD2Q9NVH0 621 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 IFT80Q9P2H3 777 aaPredicted RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 P2RX2Q9UBL9 471 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 C19orf25Q9UFG5 118 aaPredicted RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 RPS6KA6Q9UK32 745 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 C19orf53Q9UNZ5 99 aaPredicted RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 SAMD4AQ9UPU9 718 aaKnown RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 LIPT1Q9Y234 373 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 ANGPT4Q9Y264 503 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 PADI2Q9Y2J8 665 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 MAU2Q9Y6X3 613 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 NINQ8N4C6 2090 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 IGKV3D-11A0A0A0MRZ8 115 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 TCRBV16S1A1N1A0A5B0 115 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 TCRBV3S1A0A5B6 114 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 VSTM2BA6NLU5 285 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 CXCR6O00574 342 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 CASC3O15234 703 aaKnown RBP6.17□□□□□ -1.42
VAMP3-202ENST00000470357 RRP8O43159 456 aaKnown RBP6.17□□□□□ -1.42
VAMP3-202ENST00000470357 BRINP1O60477 761 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 DNAJB6O75190 326 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 IGHEP01854 428 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 IFNA16P05015 189 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 HMGN2P05204 90 aaKnown RBP6.17□□□□□ -1.42
VAMP3-202ENST00000470357 C8BP07358 591 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 HEXBP07686 556 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 ZGLP1P0C6A0 271 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 FCGR1AP12314 374 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 CCL4P13236 92 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 TNNI3P19429 210 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 MATN1P21941 496 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 PSMA4P25789 261 aaKnown RBP6.17□□□□□ -1.42
VAMP3-202ENST00000470357 CD82P27701 267 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 MC3RP41968 323 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 GZMMP51124 257 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 MVDP53602 400 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 OR4D2P58180 307 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 CXADRP78310 365 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 CDK6Q00534 326 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 RHDQ02161 417 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 SELPLGQ14242 412 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 NSDHLQ15738 373 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 SYT16Q17RD7 645 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 PRICKLE4Q2TBC4 344 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 FAM98BQ52LJ0 330 aaKnown RBP6.17□□□□□ -1.42
VAMP3-202ENST00000470357 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.17□□□□□ -1.42
VAMP3-202ENST00000470357 C1orf189Q5VU69 101 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 GLYATQ6IB77 296 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 REEP3Q6NUK4 255 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 CDC73Q6P1J9 531 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 SPATA24Q86W54 205 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 KRT73Q86Y46 540 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 OR4N5Q8IXE1 308 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 ZZZ3Q8IYH5 903 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 LGI4Q8N135 537 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 CDRT4Q8N9R6 151 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 FAM156AQ8NDB6 213 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 TMEM52Q8NDY8 209 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 HIPK4Q8NE63 616 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 OR5AK3PQ8NH89 298 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 OR14A16Q8NHC5 309 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 PNPT1Q8TCS8 783 aaKnown RBP6.17□□□□□ -1.42
VAMP3-202ENST00000470357 ADAMTS15Q8TE58 950 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 RNF141Q8WVD5 230 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 SNRNP27Q8WVK2 155 aaKnown RBP6.17□□□□□ -1.42
VAMP3-202ENST00000470357 WDR60Q8WVS4 1066 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 RASSF5Q8WWW0 418 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 LZICQ8WZA0 190 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 PMM1Q92871 262 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 UCN3Q969E3 161 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 FAM162AQ96A26 154 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 CTHRC1Q96CG8 243 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 DUS3LQ96G46 650 aaKnown RBP6.17□□□□□ -1.42
VAMP3-202ENST00000470357 ZNF607Q96SK3 696 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 STACQ99469 402 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 UGT2B28Q9BY64 529 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 TRIM4Q9C037 500 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 CHST8Q9H2A9 424 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 IKZF5Q9H5V7 419 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 DUSP22Q9NRW4 184 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 OLAHQ9NV23 265 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 GPATCH2Q9NW75 528 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 ADPRHL2Q9NX46 363 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 MAT2BQ9NZL9 334 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 PRODH2Q9UF12 536 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 PISDQ9UG56 409 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 PADI1Q9ULC6 663 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 ERVK-11Q9UQG0 969 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 TMEM184BQ9Y519 407 aaPredicted RBP6.17□□□□□ -1.42
VAMP3-202ENST00000470357 CLCA3PQ9Y6N3 262 aa6.17□□□□□ -1.42
VAMP3-202ENST00000470357 LRRK2Q5S007 2527 aa6.16□□□□□ -1.42
VAMP3-202ENST00000470357 TLN1Q9Y490 2541 aaKnown RBP6.16□□□□□ -1.42
VAMP3-202ENST00000470357 DHRS12A0PJE2 317 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms