RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ULK1O75385 1050 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 BCAS2O75934 225 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-204ENST00000469207 GOSR1O95249 250 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 OPN1LWP04000 364 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 JUNP05412 331 aaKnown RBP11.05□□□□□ -0.64
HDAC3-204ENST00000469207 PEPDP12955 493 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 POU2F1P14859 743 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 CRYGSP22914 178 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 LOXP28300 417 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-204ENST00000469207 EVI2BP34910 448 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 KRT20P35900 424 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 UGT2B10P36537 528 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 KCNJ5P48544 419 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 ETF1P62495 437 aaKnown RBP11.05□□□□□ -0.64
HDAC3-204ENST00000469207 EFR3AQ14156 821 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 TSNAXIP1Q2TAA8 658 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 ZNF678Q5SXM1 525 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 RAET1LQ5VY80 246 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 C8orf74Q6P047 294 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 CHMP1BQ7LBR1 199 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 ZNF572Q7Z3I7 529 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-204ENST00000469207 YTHDF3Q7Z739 585 aaKnown RBP11.05□□□□□ -0.64
HDAC3-204ENST00000469207 HEATR5AQ86XA9 2040 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 FADS6Q8N9I5 356 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 CDC26Q8NHZ8 85 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 PPP1R14CQ8TAE6 165 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 METTL6Q8TCB7 284 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 DUSP19Q8WTR2 217 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 NUDT8Q8WV74 236 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 IFT81Q8WYA0 676 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 COX4I2Q96KJ9 171 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 MARK4Q96L34 752 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 TMEM237Q96Q45 408 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 FUT8Q9BYC5 575 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 SLC35C2Q9NQQ7 365 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 NMRK1Q9NWW6 199 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 OR10H1Q9Y4A9 318 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 OR2M5A3KFT3 312 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 PLOD3O60568 738 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 ABCB7O75027 752 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 AQP8O94778 261 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 PLAUP00749 431 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 COL6A2P12110 1019 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 RFX3P48380 749 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 FOXA1P55317 472 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 C2orf80Q0P641 193 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 PON3Q15166 354 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 BCL2A1Q16548 175 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 EXOC3L2Q2M3D2 409 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 ERCC6LQ2NKX8 1250 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 TMEM107Q6UX40 140 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 APOOLQ6UXV4 268 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 TAOK1Q7L7X3 1001 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 PIGTQ969N2 578 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 BBS4Q96RK4 519 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 CCL19Q99731 98 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 NPAS1Q99742 590 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 KLHL4Q9C0H6 718 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 ZNF226Q9NYT6 803 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 CLEC4AQ9UMR7 237 aa11.04□□□□□ -0.64
HDAC3-204ENST00000469207 GXYLT2A0PJZ3 443 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 MYO1GB0I1T2 1018 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 INAFM1C9JVW0 142 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 C16orf97H3BN30 126 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 KRT6AP02538 564 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 KRT6BP04259 564 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 CRHP06850 196 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 THBDP07204 575 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 ANXA4P09525 319 aaPredicted RBP11.03□□□□□ -0.64
HDAC3-204ENST00000469207 GCAP28676 217 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 HMOX2P30519 316 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 TIA1P31483 386 aaKnown RBP eCLIP11.03□□□□□ -0.64
HDAC3-204ENST00000469207 MPIP34949 423 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 SLC6A8P48029 635 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 KRT6CP48668 564 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 SERPINB9P50453 376 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 EEF1A1P68104 462 aaKnown RBP11.03□□□□□ -0.64
HDAC3-204ENST00000469207 ZNF155Q12901 538 aaPredicted RBP11.03□□□□□ -0.64
HDAC3-204ENST00000469207 CSTF3Q12996 717 aaKnown RBP11.03□□□□□ -0.64
HDAC3-204ENST00000469207 RASA2Q15283 850 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 EEF1A1P5Q5VTE0 462 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 OR2A2Q6IF42 318 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 PPP4R4Q6NUP7 873 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 GPRIN3Q6ZVF9 776 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 GALNT10Q86SR1 603 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 RELL1Q8IUW5 271 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 FAM9CQ8IZT9 166 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 LRRC75A-AS1Q8N1F1 130 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 MEIOBQ8N635 442 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 C11orf24Q96F05 449 aaPredicted RBP11.03□□□□□ -0.64
HDAC3-204ENST00000469207 PIP5K1AQ99755 562 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 GLIPR2Q9H4G4 154 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 RNF122Q9H9V4 155 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 TAS2R9Q9NYW1 312 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 SENP1Q9P0U3 644 aa11.03□□□□□ -0.64
HDAC3-204ENST00000469207 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.03□□□□□ -0.64
HDAC3-204ENST00000469207 DSCAMO60469 2012 aa11.02□□□□□ -0.64
HDAC3-204ENST00000469207 NSD1Q96L73 2696 aaPredicted RBP11.02□□□□□ -0.64
HDAC3-204ENST00000469207 GOLGA8RI6L899 631 aa11.02□□□□□ -0.65
HDAC3-204ENST00000469207 UPK1AO00322 258 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms