RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 PTHP01270 115 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 ZNF888P0CJ79 500 aaPredicted RBP8.25□□□□□ -1.09
HPS4-209ENST00000466781 EMP2P54851 167 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 CFAP77Q6ZQR2 320 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 RBM12BQ8IXT5 1001 aaKnown RBP8.25□□□□□ -1.09
HPS4-209ENST00000466781 APCDD1Q8J025 514 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 ZNF619Q8N2I2 560 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 HUS1BQ8NHY5 278 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 SLCO2A1Q92959 643 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 HCAR1Q9BXC0 346 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 KCNK12Q9HB15 430 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 FAM118AQ9NWS6 357 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 MKS1Q9NXB0 559 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 GIMAP2Q9UG22 337 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 SLC7A8Q9UHI5 535 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 LOC105369274A0A096LPK9 316 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 PCDH17O14917 1159 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 STK17BO94768 372 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 IGHEP01854 428 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 ARSAP15289 507 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 CRABP1P29762 137 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 FXYD4P59646 89 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 EEF1A2Q05639 463 aaKnown RBP8.25□□□□□ -1.09
HPS4-209ENST00000466781 CNN3Q15417 329 aaKnown RBP8.25□□□□□ -1.09
HPS4-209ENST00000466781 NADK2Q4G0N4 442 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 Q6ZSR6 202 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 S100A7AQ86SG5 101 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 SLC35F2Q8IXU6 374 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 OR4N4Q8N0Y3 316 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 RSC1A1Q92681 617 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 MRGPRX2Q96LB1 330 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 SLC2A13Q96QE2 648 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 ENKD1Q9H0I2 346 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 OR10A5Q9H207 317 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 OR10A2Q9H208 303 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 SLAMF7Q9NQ25 335 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 HCFC1R1Q9NWW0 138 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 RABL2AQ9UBK7 228 aaPredicted RBP8.25□□□□□ -1.09
HPS4-209ENST00000466781 RABL2BQ9UNT1 228 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 ZNF487B1APH4 448 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 CD46P15529 392 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 CREB1P16220 341 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 HTR2AP28223 471 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 RPS26P62854 115 aaKnown RBP8.25□□□□□ -1.09
HPS4-209ENST00000466781 EEF1A1P68104 462 aaKnown RBP8.25□□□□□ -1.09
HPS4-209ENST00000466781 ZNF616Q08AN1 781 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 DOC2AQ14183 400 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 ATP6AP1Q15904 470 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 C6orf141Q5SZD1 244 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 TAS1R1Q7RTX1 841 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 BEST3Q8N1M1 668 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 R3HDMLQ9H3Y0 253 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 BCORQ6W2J9 1755 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 INMT-MINDY4F8WBC2 141 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 PRPS1P60891 318 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 CDK3Q00526 305 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 CAMK2DQ13557 499 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 SHHQ15465 462 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 TRIM73Q86UV7 250 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 TTC9BQ8N6N2 239 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 OR1S1Q8NH92 325 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 C16orf78Q8WTQ4 265 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 PEX13Q92968 403 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 RDH12Q96NR8 316 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 ALOXE3Q9BYJ1 711 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 ACTR10Q9NZ32 417 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 KIAA0355O15063 1070 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 YY2O15391 372 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 LCKP06239 509 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 PROZP22891 400 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 PYCR1P32322 319 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 NUDT1P36639 197 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 P2RY2P41231 377 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 MC3RP41968 323 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 CXCL12P48061 93 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 GPX6P59796 221 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 LHFPL3Q86UP9 236 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 OR4K13Q8NH42 304 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 MS4A4EQ96PG1 132 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 APOOQ9BUR5 198 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 MTHFD2LQ9H903 347 aaPredicted RBP8.25□□□□□ -1.09
HPS4-209ENST00000466781 SLC6A14Q9UN76 642 aa8.25□□□□□ -1.09
HPS4-209ENST00000466781 EEF1E1-BLOC1S5C9J1V9 151 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 HSBP1L1C9JCN9 74 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 PPP1R3DO95685 299 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 EIF4EP06730 217 aaKnown RBP8.24□□□□□ -1.09
HPS4-209ENST00000466781 TIMP2P16035 220 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 ELK4P28324 431 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 SOX3P41225 446 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 TGFBR3Q03167 851 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 C6orf136Q5SQH8 315 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 TMEM236Q5W0B7 351 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 NANOGP8Q6NSW7 305 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 PRR22Q8IZ63 422 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 PQLC3Q8N755 202 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 RHEBL1Q8TAI7 183 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 HDAC2Q92769 488 aaKnown RBP8.24□□□□□ -1.09
HPS4-209ENST00000466781 ECHDC3Q96DC8 303 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 MALSU1Q96EH3 234 aa8.24□□□□□ -1.09
HPS4-209ENST00000466781 NANOGQ9H9S0 305 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms