RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ZNF621Q6ZSS3 439 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 FUNDC1Q8IVP5 155 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 COX18Q8N8Q8 333 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 POGLUT1Q8NBL1 392 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 VPS37AQ8NEZ2 397 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 OR56A1Q8NGH5 318 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 ADAMTS15Q8TE58 950 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 TMCO6Q96DC7 493 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 CCDC115Q96NT0 180 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 OR7D2Q96RA2 312 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 PANX1Q96RD7 426 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 OSBPL11Q9BXB4 747 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 ACTRT3Q9BYD9 372 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 NEUROD4Q9HD90 331 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 ZFP64Q9NPA5 681 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 FAM120CQ9NX05 1096 aaKnown RBP10.67□□□□□ -0.7
CUX1-207ENST00000465461 GIN1Q9NXP7 522 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 CCDC167Q9P0B6 97 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 BTNL2Q9UIR0 455 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 SVILO95425 2214 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 NBASA2RRP1 2371 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 NPIPA5A0A0B4J1W7 369 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 ANKRD33BA6NCL7 494 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 CCDC154A6NI56 674 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 B4DXG7 233 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 NPIPA7E9PJI5 369 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 ACOT7O00154 380 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 NR5A2O00482 541 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 GMFGO60234 142 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 KCNK2O95069 426 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 KCNH1O95259 989 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 UTS2O95399 124 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 IL6P05231 212 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 NPIPA8P0DM63 369 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 UQCRC2P22695 453 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 TCEA1P23193 301 aaKnown RBP10.66□□□□□ -0.7
CUX1-207ENST00000465461 TRPC1P48995 793 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 MAN2A2P49641 1150 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 STX1BP61266 288 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 RPP38P78345 283 aaKnown RBP10.66□□□□□ -0.7
CUX1-207ENST00000465461 STX5Q13190 355 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 EFR3AQ14156 821 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 GRAMD1BQ3KR37 738 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 VPS26BQ4G0F5 336 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 AGKQ53H12 422 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 C1QL3Q5VWW1 255 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 TNFAIP8L2Q6P589 184 aaPredicted RBP10.66□□□□□ -0.7
CUX1-207ENST00000465461 ZCCHC12Q6PEW1 402 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 SLC2A7Q6PXP3 512 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 APOOLQ6UXV4 268 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 MARCH3Q86UD3 253 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 PACS2Q86VP3 889 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 SLC22A16Q86VW1 577 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 CHERPQ8IWX8 916 aaKnown RBP10.66□□□□□ -0.7
CUX1-207ENST00000465461 WDSUB1Q8N9V3 476 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 GLB1L3Q8NCI6 653 aaPredicted RBP10.66□□□□□ -0.7
CUX1-207ENST00000465461 PNPT1Q8TCS8 783 aaKnown RBP10.66□□□□□ -0.7
CUX1-207ENST00000465461 SFXN5Q8TD22 340 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 RAB8BQ92930 207 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 NTNG2Q96CW9 530 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 SLC35G5Q96KT7 338 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 SECISBP2Q96T21 854 aaKnown RBP10.66□□□□□ -0.7
CUX1-207ENST00000465461 SLC35A5Q9BS91 424 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 OR51I1Q9H343 314 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 PIGUQ9H490 435 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 CCDC134Q9H6E4 229 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 SERHLQ9NQF3 203 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 BOKQ9UMX3 212 aaPredicted RBP10.66□□□□□ -0.7
CUX1-207ENST00000465461 FAF1Q9UNN5 650 aaPredicted RBP10.66□□□□□ -0.7
CUX1-207ENST00000465461 ZGRF1Q86YA3 2104 aa10.66□□□□□ -0.7
CUX1-207ENST00000465461 TRGV8A0A0C4DH27 118 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 FAM234BA2RU67 622 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 RFXANKO14593 260 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 ADAM10O14672 748 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 FADS1O60427 444 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 TRAPPC6AO75865 159 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 SNX4O95219 450 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 RNF224P0DH78 156 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 OR12D1P0DN82 309 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 GDF1P27539 372 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 EVI2BP34910 448 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 CHI3L1P36222 383 aaPredicted RBP10.65□□□□□ -0.7
CUX1-207ENST00000465461 ARFIP2P53365 341 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 SEC24CP53992 1094 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 GAS1P54826 345 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 POU6F2P78424 691 aaPredicted RBP10.65□□□□□ -0.7
CUX1-207ENST00000465461 TOMM20Q15388 145 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 HYAL4Q2M3T9 481 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 KRTCAP3Q53RY4 240 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 TBCELQ5QJ74 424 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 SAXO2Q658L1 398 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 SLC30A6Q6NXT4 461 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 C3P1Q6ZMU1 363 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 RNF130Q86XS8 419 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 SPPL2CQ8IUH8 684 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 GHDCQ8N2G8 530 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 FAM109AQ8N4B1 249 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 GATSQ8NAP1 163 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 OR1J4Q8NGS1 313 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 OR4C3Q8NH37 302 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms