RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 C6orf62Q9GZU0 229 aaPredicted RBP5.59□□□□□ -1.51
SMARCC1-204ENST00000462198 IPPKQ9H8X2 491 aa5.59□□□□□ -1.51
SMARCC1-204ENST00000462198 TMEM216Q9P0N5 145 aa5.59□□□□□ -1.51
SMARCC1-204ENST00000462198 TINAGQ9UJW2 476 aa5.59□□□□□ -1.51
SMARCC1-204ENST00000462198 CNOT11Q9UKZ1 510 aaKnown RBP5.59□□□□□ -1.51
SMARCC1-204ENST00000462198 CBLCQ9ULV8 474 aa5.59□□□□□ -1.51
SMARCC1-204ENST00000462198 SLC22A14Q9Y267 594 aa5.59□□□□□ -1.51
SMARCC1-204ENST00000462198 PADI2Q9Y2J8 665 aa5.59□□□□□ -1.51
SMARCC1-204ENST00000462198 KLHL20Q9Y2M5 609 aa5.59□□□□□ -1.51
SMARCC1-204ENST00000462198 MEMO1Q9Y316 297 aa5.59□□□□□ -1.51
SMARCC1-204ENST00000462198 PLLPQ9Y342 182 aa5.59□□□□□ -1.51
SMARCC1-204ENST00000462198 KCNE2Q9Y6J6 123 aa5.59□□□□□ -1.51
SMARCC1-204ENST00000462198 ZANQ9Y493 2812 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 A0A0G2JND7 137 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 TARM1B6A8C7 271 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 TMEM150CB9EJG8 249 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 STX16-NPEPL1H3BU86 382 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 H7BY64 318 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 ZNF561-AS1K7EIQ3 104 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 STX16O14662 325 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 GSTA4O15217 222 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 KLK8O60259 260 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 NOL3O60936 208 aaKnown RBP5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 STK16O75716 305 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 SERPINI2O75830 405 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 WISP2O76076 250 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 IFNA16P05015 189 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 MTHFD2P13995 350 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 RPS2P15880 293 aaKnown RBP5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 PRKCAP17252 672 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 HRH2P25021 359 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 GRK2P25098 689 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 GRK3P35626 688 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 GGT5P36269 586 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 ARL1P40616 181 aaPredicted RBP5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 ALDH3B2P48448 385 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 CLK3P49761 638 aaKnown RBP5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 AGTR2P50052 363 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 CCR8P51685 355 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 SCAND1P57086 179 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 VBP1P61758 197 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 POLR2GP62487 172 aaKnown RBP eCLIP5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 SELPLGQ14242 412 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 OXA1LQ15070 435 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 ZIC1Q15915 447 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 DUSP7Q16829 419 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 LRRC36Q1X8D7 754 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 LSM12Q3MHD2 195 aaKnown RBP5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 IGSF11Q5DX21 431 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 FBXO48Q5FWF7 155 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 C1orf146Q5VVC0 180 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 MLIPQ5VWP3 458 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 ATG16L1Q676U5 607 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 ANKRD34AQ69YU3 496 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 FIGLAQ6QHK4 219 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 LINC00696Q6ZRV3 163 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 CDHR3Q6ZTQ4 885 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 LRRC70Q7Z2Q7 622 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 TMPRSS11BQ86T26 416 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 STX12Q86Y82 276 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 CDH26Q8IXH8 852 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 TBC1D19Q8N5T2 526 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 METTL25Q8N6Q8 603 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 PTGR2Q8N8N7 351 aaPredicted RBP5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 ASCC1Q8N9N2 400 aaKnown RBP5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 RDH11Q8TC12 318 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 SLC5A11Q8WWX8 675 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 NEIL2Q969S2 332 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 RERGQ96A58 199 aaPredicted RBP5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 CCDC126Q96EE4 140 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 ZNF486Q96H40 463 aaPredicted RBP5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 FAR2Q96K12 515 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 PRAP1Q96NZ9 151 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 OR4K3Q96R72 315 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 LMF1Q96S06 567 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 TMEM79Q9BSE2 394 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 THTPAQ9BU02 230 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 C1orf50Q9BV19 199 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 CDIP1Q9H305 208 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 SLA2Q9H6Q3 261 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 EPS8L2Q9H6S3 715 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 FAM60AQ9NP50 221 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 SLC6A20Q9NP91 592 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 POLE3Q9NRF9 147 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 TMEM184CQ9NVA4 438 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 DNAJC11Q9NVH1 559 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 GPATCH2Q9NW75 528 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 OPTCQ9UBM4 332 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 ZNF69Q9UC07 566 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 SERTAD3Q9UJW9 196 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 PTBP2Q9UKA9 531 aaKnown RBP5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 EDARQ9UNE0 448 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 PLCL2Q9UPR0 1127 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 SH2B3Q9UQQ2 575 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 PLEKHA6Q9Y2H5 1048 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 AP3M1Q9Y2T2 418 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 PTRH2Q9Y3E5 179 aaKnown RBP5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 ZNF175Q9Y473 711 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 SNX8Q9Y5X2 465 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 CEPT1Q9Y6K0 416 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms