RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 KIAA0513O60268 411 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 E2F6O75461 281 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 KCNK2O95069 426 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 RAB40ALP0C0E4 278 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 CT45A8P0DMV1 189 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 CT45A9P0DMV2 189 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 CCL4P13236 92 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 ANXA8P13928 327 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 CSRP1P21291 193 aaKnown RBP13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 LAMA1P25391 3075 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 ADH7P40394 386 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 CHRNEQ04844 493 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 ZNF155Q12901 538 aaPredicted RBP13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 DAG1Q14118 895 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 PUM1Q14671 1186 aaKnown RBP eCLIP13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 ZNF141Q15928 474 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 NRF1Q16656 503 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 LIN52Q52LA3 116 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 CT45A2Q5DJT8 189 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 RNF220Q5VTB9 566 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 GRAMD2AQ8IUY3 354 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 CBR4Q8N4T8 237 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 PIK3C3Q8NEB9 887 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 GPR32P1Q8NGA4 272 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 WDR36Q8NI36 951 aaKnown RBP13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 SLC2A12Q8TD20 617 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 ZNF721Q8TF20 911 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 DHRS1Q96LJ7 313 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 NR1H4Q96RI1 486 aaPredicted RBP13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 SLC29A1Q99808 456 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 SPRY4Q9C004 299 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 ANKRD19PQ9H560 264 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 ANKRA2Q9H9E1 313 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 HHATLQ9HCP6 504 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 APMAPQ9HDC9 416 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 PARD6AQ9NPB6 346 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 CTSFQ9UBX1 484 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 ENOPH1Q9UHY7 261 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 PADI1Q9ULC6 663 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 LOXL2Q9Y4K0 774 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 CCDC88CQ9P219 2028 aa13.08□□□□□ -0.31
GTF3C5-208ENST00000461871 LOC102723996A0A087X1L8 192 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 A0A1W2PQ72 361 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 PLD2O14939 933 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 FCMRO60667 390 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 FMO6PO60774 539 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 OXSR1O95747 527 aaPredicted RBP13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 OPN1SWP03999 348 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 CLPSP04118 112 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 ALPLP05186 524 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 CCNYL3P0C7X3 344 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 THRBP10828 461 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 NID1P14543 1247 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 IL7RP16871 459 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 CDH2P19022 906 aaPredicted RBP13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 SSTR4P31391 388 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 SLC5A2P31639 672 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 PTGER1P34995 402 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 GPR143P51810 404 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 PGDP52209 483 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 RAD23AP54725 363 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 AQP4P55087 323 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 MED21Q13503 144 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 DECR1Q16698 335 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 RPS26P11Q5JNZ5 115 aaPredicted RBP13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 COLEC12Q5KU26 742 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 SLC29A4Q7RTT9 530 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 TSEN54Q7Z6J9 526 aaKnown RBP13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 ANKRD37Q7Z713 158 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 GALNT10Q86SR1 603 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 ZNF605Q86T29 641 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 STK32CQ86UX6 486 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 LAPTM4BQ86VI4 370 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 CARM1Q86X55 608 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 EPHX4Q8IUS5 362 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 KBTBD2Q8IY47 623 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 SHISA5Q8N114 240 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 SMYD1Q8NB12 490 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 LCORQ96JN0 433 aaPredicted RBP13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 SPSB2Q99619 263 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 LPAR4Q99677 370 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 ARHGDIGQ99819 225 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 ULBP3Q9BZM4 244 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 AMBRA1Q9C0C7 1298 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 SMPD3Q9NY59 655 aaPredicted RBP13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 C3orf18Q9UK00 162 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 CBLCQ9ULV8 474 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 ABCG2Q9UNQ0 655 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 SAMHD1Q9Y3Z3 626 aaKnown RBP13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 ORC6Q9Y5N6 252 aa13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 COL27A1Q8IZC6 1860 aaPredicted RBP13.08□□□□□ -0.32
GTF3C5-208ENST00000461871 A0A1W2PRQ8 180 aa13.07□□□□□ -0.32
GTF3C5-208ENST00000461871 SAGE2PA6NJ88 616 aa13.07□□□□□ -0.32
GTF3C5-208ENST00000461871 SAC3D1A6NKF1 404 aa13.07□□□□□ -0.32
GTF3C5-208ENST00000461871 SOCS2O14508 198 aa13.07□□□□□ -0.32
GTF3C5-208ENST00000461871 CSO75390 466 aaKnown RBP13.07□□□□□ -0.32
GTF3C5-208ENST00000461871 MT-ND1P03886 318 aa13.07□□□□□ -0.32
GTF3C5-208ENST00000461871 JMJD7P0C870 316 aa13.07□□□□□ -0.32
GTF3C5-208ENST00000461871 NAGAP17050 411 aa13.07□□□□□ -0.32
GTF3C5-208ENST00000461871 ATP12AP54707 1039 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms