RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 KCNH1O95259 989 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 RFX3P48380 749 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 PSMD4P55036 377 aaKnown RBP18.94■□□□□ 0.62
VARS-218ENST00000459667 TOMM20Q15388 145 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 GXYLT1Q4G148 440 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 EMC4Q5J8M3 183 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 MFSD12Q6NUT3 480 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 MRGPRGQ86SM5 289 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 WDR75Q8IWA0 830 aaKnown RBP18.94■□□□□ 0.62
VARS-218ENST00000459667 ZNF808Q8N4W9 903 aaPredicted RBP18.94■□□□□ 0.62
VARS-218ENST00000459667 OR5M9Q8NGP3 310 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 PSMA8Q8TAA3 256 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 NEIL3Q8TAT5 605 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 PHF10Q8WUB8 498 aaKnown RBP18.94■□□□□ 0.62
VARS-218ENST00000459667 RNF138Q8WVD3 245 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 PIK3R3Q92569 461 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 HOXB13Q92826 284 aaPredicted RBP18.94■□□□□ 0.62
VARS-218ENST00000459667 RMND5BQ96G75 393 aaPredicted RBP18.94■□□□□ 0.62
VARS-218ENST00000459667 C7orf26Q96N11 449 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 DMRTA2Q96SC8 542 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 CXorf36Q9H7Y0 433 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 NEUROD4Q9HD90 331 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 PNPLA3Q9NST1 481 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 ZNF446Q9NWS9 450 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 SPRR3Q9UBC9 169 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 ACAD8Q9UKU7 415 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 HRH3Q9Y5N1 445 aa18.94■□□□□ 0.62
VARS-218ENST00000459667 NCOA6Q14686 2063 aaPredicted RBP18.93■□□□□ 0.62
VARS-218ENST00000459667 GOLGA8QA0A0J9YX86 632 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 GXYLT2A0PJZ3 443 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 GOLGA8OA6NCC3 632 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 GOLGA8NF8WBI6 632 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 CFLARO15519 480 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 IL33O95760 270 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 HPNP05981 417 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 FREM3P0C091 2139 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 ACP2P11117 423 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 EPHA3P29320 983 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 EVI2BP34910 448 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 MAP3K8P41279 467 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 PRIM2P49643 509 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 SMSP52788 366 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 SPDYE7PQ495Y7 208 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 OR4F3Q6IEY1 312 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 JADE3Q92613 823 aa18.93■□□□□ 0.62
VARS-218ENST00000459667 WDR55Q9H6Y2 383 aaPredicted RBP18.93■□□□□ 0.62
VARS-218ENST00000459667 FIGNL2A6NMB9 653 aa18.92■□□□□ 0.62
VARS-218ENST00000459667 SCO2O43819 266 aa18.92■□□□□ 0.62
VARS-218ENST00000459667 ALOX5P09917 674 aa18.92■□□□□ 0.62
VARS-218ENST00000459667 ALDOCP09972 364 aaKnown RBP18.92■□□□□ 0.62
VARS-218ENST00000459667 CCT3P49368 545 aaKnown RBP18.92■□□□□ 0.62
VARS-218ENST00000459667 WLSQ5T9L3 541 aa18.92■□□□□ 0.62
VARS-218ENST00000459667 ZNF585AQ6P3V2 769 aa18.92■□□□□ 0.62
VARS-218ENST00000459667 ZCCHC12Q6PEW1 402 aa18.92■□□□□ 0.62
VARS-218ENST00000459667 WDSUB1Q8N9V3 476 aa18.92■□□□□ 0.62
VARS-218ENST00000459667 SLC16A11Q8NCK7 471 aa18.92■□□□□ 0.62
VARS-218ENST00000459667 OR56A1Q8NGH5 318 aa18.92■□□□□ 0.62
VARS-218ENST00000459667 C16orf58Q96GQ5 468 aa18.92■□□□□ 0.62
VARS-218ENST00000459667 YIPF4Q9BSR8 244 aa18.92■□□□□ 0.62
VARS-218ENST00000459667 SERHLQ9NQF3 203 aa18.92■□□□□ 0.62
VARS-218ENST00000459667 AIG1Q9NVV5 245 aa18.92■□□□□ 0.62
VARS-218ENST00000459667 UTP20O75691 2785 aaKnown RBP18.91■□□□□ 0.62
VARS-218ENST00000459667 C15orf38-AP3S2A0A0A6YYH1 394 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 ANKRD28O15084 1053 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 CBR3O75828 277 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 HMGN2P05204 90 aaKnown RBP18.91■□□□□ 0.62
VARS-218ENST00000459667 SOAT1P35610 550 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 KIR3DL1P43629 444 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 CLNS1AP54105 237 aaKnown RBP18.91■□□□□ 0.62
VARS-218ENST00000459667 HBA1P69905 142 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 TP53BP2Q13625 1128 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 LASP1Q14847 261 aaKnown RBP18.91■□□□□ 0.62
VARS-218ENST00000459667 DUSP5Q16690 384 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 EIPR1Q53HC9 387 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 NXNQ6DKJ4 435 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 HIST2H2BCQ6DN03 193 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 SPATA19Q7Z5L4 167 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 PLCZ1Q86YW0 608 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 ARFGAP2Q8N6H7 521 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 FAM83FQ8NEG4 500 aaPredicted RBP18.91■□□□□ 0.62
VARS-218ENST00000459667 OR8J2Q8NGG1 315 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 SFXN5Q8TD22 340 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 TESCQ96BS2 214 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 OTUB1Q96FW1 271 aaPredicted RBP18.91■□□□□ 0.62
VARS-218ENST00000459667 CHMP6Q96FZ7 201 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 MAGEB18Q96M61 343 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 FLRT3Q9NZU0 649 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 ABCG2Q9UNQ0 655 aa18.91■□□□□ 0.62
VARS-218ENST00000459667 RNASET2O00584 256 aaKnown RBP18.9■□□□□ 0.62
VARS-218ENST00000459667 ATP8B1O43520 1251 aa18.9■□□□□ 0.62
VARS-218ENST00000459667 FADS1O60427 444 aa18.9■□□□□ 0.62
VARS-218ENST00000459667 IGKV1D-16P01601 117 aa18.9■□□□□ 0.62
VARS-218ENST00000459667 GAS1P54826 345 aa18.9■□□□□ 0.62
VARS-218ENST00000459667 NME5P56597 212 aa18.9■□□□□ 0.62
VARS-218ENST00000459667 WNT3P56703 355 aa18.9■□□□□ 0.62
VARS-218ENST00000459667 DPY19L1Q2PZI1 675 aa18.9■□□□□ 0.62
VARS-218ENST00000459667 WIPI1Q5MNZ9 446 aaPredicted RBP18.9■□□□□ 0.62
VARS-218ENST00000459667 EXOSC6Q5RKV6 272 aaKnown RBP18.9■□□□□ 0.62
VARS-218ENST00000459667 TMEM211Q6ICI0 200 aa18.9■□□□□ 0.62
VARS-218ENST00000459667 XKRXQ6PP77 449 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms